Brassica napus (rape): 106377184
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Entry
106377184 CDS
T04128
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.3
KO
K14487
auxin responsive GH3 gene family
Organism
bna
Brassica napus (rape)
Pathway
bna04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
106377184
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
106377184
NCBI-ProteinID:
XP_048597453
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Position
A9:39203472..39205936
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AA seq
596 aa
AA seq
DB search
MIVDLALKSPMIHTPQSDKDLKALRFIEEMTRNVDFVQKKVIKEILSRNSETEYLKRFGL
KGSTDRKTFKNKVPVITYDDIKPEIQRIANGDRSMILSSHPITEFLTSSGTSAGERKLMP
TIEEDMDRRQLLYSLQMPVMNLYVPGLGKGKALHFLFVKSESKTPGGLPARPVLTSYYKS
EHFKKRPYDPYNVYTSPNEAILCPDSSQSMYTQMLCGLLMRHEVLRLGAVFASGLLRAIR
FLQTNWQELVNDISTGTLSSRISDPGIRESMSKILTKPDQELADYIASVCCHDSNWEGVI
TKIWPNTKYLDVIVTGAMAQYIPMLEYYSGGLPMACTMYASSESYFGINLKPMCKPSEVS
YTIMPNMAYFEFLPHEDATERTTELVELADVEVGKEYELVITTYAGLYRYRVGDILQVTG
FYNSAPQFKFVRRKNVLLSIESDKTDEAELQKAVENASVLLEEQGTRVIEYTSYADTKTI
PGHYVIYWELLVKDQANAPSDEVMAKCCLEMEESLNSVYRQSRVADKSIGPLEIRVVKNG
TFEELMDYAISRGASINQYKVPRCVSFTPIMELLDSRVASTHFSPALPQWSPERRR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgatcgttgatttagctttgaagtctccgatgatccatacaccacagtccgacaaggac
ttgaaagctctcaggttcattgaggagatgacacgtaatgtcgatttcgttcagaagaaa
gtcatcaaggagatacttagtcgtaactcagagactgagtatctgaaacggttcggtctt
aagggatccaccgaccggaaaacatttaagaacaaagttccggttattacttatgatgat
attaaaccggagattcaacgtatagcaaatggtgaccggtccatgattttgtcttctcac
cccatcaccgagttcctgaccagctctggcacttctgctggtgaaaggaagttaatgccg
actattgaagaagacatggaccgacgtcagcttttatacagtcttcagatgcctgtgatg
aacctctacgtgccgggactaggcaaaggcaaagctctacatttcttgttcgtgaagtcg
gaatcaaagacacctggtggactaccggctcgtccggtgctcacaagctattacaaaagc
gaacatttcaagaaacgtccatacgacccgtacaacgtgtacacgagccccaacgaagcc
atcctttgtccagactcgtcgcaaagcatgtacactcaaatgctttgcggtctcctcatg
cgccacgaagtccttcgtctcggtgctgtcttcgcttccggtctcctccgtgccatacgg
ttcctccaaaccaactggcaagagctcgtcaacgatatatcaaccggaaccctaagctcg
agaatctctgacccggggatcagagaaagcatgtccaagatcttgaccaaaccggaccaa
gaattggctgactacatagcttcggtttgttgtcacgacagtaactgggaaggtgttata
actaagatttggcccaacactaagtaccttgacgtcatcgtcacgggagccatggctcag
tatattccgatgcttgagtactatagcggcgggttaccgatggcttgtacgatgtacgca
tcgtcagagagttactttgggattaacctaaaaccgatgtgtaaaccttctgaggtttct
tacaccattatgccaaacatggcttacttcgagtttctccctcatgaagacgcaactgaa
agaacaaccgagctcgtggagctggctgatgtcgaggtggggaaagagtacgagctcgtg
atcactacctacgcggggctttaccgctacagagttggcgatattcttcaggtgactggc
ttctacaactccgctccgcagttcaagttcgtgaggaggaagaacgttttgcttagcatc
gagtctgataaaaccgacgaagctgagctccaaaaggcggtagagaacgcgtcggtgtta
cttgaggagcaaggaacacgcgtgatcgagtacacgagctacgcggataccaagaccata
cctggccattacgtcatctactgggagcttcttgtgaaggatcaagccaacgctccgagc
gacgaggtcatggctaagtgctgtcttgaaatggaggagtcgttgaactctgtttataga
caaagccgggttgctgataagtccattggaccgctcgagatacgtgtggtgaagaacggg
acgtttgaggagctcatggactatgccatctcgcgaggcgcgtcgattaaccagtacaag
gtgccgagatgtgtgagcttcacgccaatcatggagctgcttgactcaagggttgcttct
acacatttcagcccggcgttgccacagtggtcacctgaacgacgtcgttga
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