Brassica napus (rape): 106378102
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Entry
106378102 CDS
T04128
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
bna
Brassica napus (rape)
Pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106378102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106378102
Spliceosome [BR:
bna03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106378102
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
106378102
NCBI-ProteinID:
XP_022558832
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Position
C5:7696217..7699227
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AA seq
512 aa
AA seq
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MAELEDSFLAEIDELSDYEEAGFEENAGSYGGDIAMDMSDLETLKSDDDLDSVSKLQKTQ
RYADIMNKVEDALGKDSYGALSEDDPLYKLIVDCNKLSVDIENEIVTVHGFIRSKYRLRF
PELESFVHHAIEYASVVKQIGDAKDLTLVPLEGLSASTIEYASVVKQIGDTKDLITQVPL
KGLSARTTVSILLTASTTKGKPLPSDVLQKTLEACDRAIELDSALKKILAFVETKMGCIA
PNLSAVVGSAVAAKLMATAGGLSGLAKMPSCNVQVLGQKRKNLDGFSAVTTQSRVGYLEH
TEIFQNTPPGLRSRAIKLLAGKSTLAARVDACRGDPSGTNGRSLREEIQKKIDKLQEPGV
ARQPKPLPVPDMTSKKKRGGRRLRKMKERYAVTEMRKLSNRVAFGVACEESSLGDGLGEG
YGMLGQGGSKRLRVSSVPSKLKLGAKLEKKLKERQYTSGVATTGTSGFMTSRLAFTPVQG
IELCNPGAVKLGSGTQSTYFSESGTFSKIKKI
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacttgaagattctttcctcgcagagattgacgagttatccgactatgaagaa
gcaggattcgaagagaacgctggaagctatggaggagatatcgccatggacatgtcagac
ttggaaaccctaaagtctgacgatgatctcgacagcgtctctaagctacagaaaactcaa
agatacgctgatataatgaacaaggtggaagacgctctcggcaaggattcgtatggagct
ttgtcagaagacgatcctctatacaaactaatcgtggactgcaacaagctctcagtcgat
atcgagaacgagatcgtcaccgtccacggctttatccgttccaagtacaggcttaggttt
ccagagctcgagtcgtttgtgcatcacgcaatcgagtacgctagcgtcgtgaaacaaatc
ggagacgctaaggacctaaccctagtccctctcgaaggtctctcagcaagtaccatcgag
tacgctagcgtcgtgaaacaaatcggagatactaaggatctaataacccaagtccctctc
aaaggtctctcagcgcgtacaactgtctctattttactcactgcttcgaccacaaagggg
aagcctctgccttcagatgtcttgcaaaagacgttagaggcgtgtgatcgagctattgag
cttgactccgcgctgaagaagattcttgccttcgttgaaaccaagatgggatgcatcgca
ccgaatctctcagccgttgtggggagtgctgttgcagccaagctcatggctactgctgga
ggcttgtcagggcttgctaagatgccttcatgtaacgttcaagttcttggtcagaagagg
aagaatcttgacggtttctctgctgtaaccacacagtctcgtgtgggttacctggagcat
actgagattttccaaaacactcctcctggacttaggagccgagctatcaaactcttggct
ggaaagtctactttggcagctagggttgacgcttgtagaggagacccgtcggggactaat
ggtaggtctctgagggaagagattcagaagaagattgacaagttgcaagagcctggtgtc
gcaaggcagcctaagccgcttcctgttccagatatgacttctaagaagaagagaggtggt
cggaggctaagaaagatgaaggaaaggtacgcggtgacggagatgaggaagctttccaac
agggtggcgtttggtgtagcatgtgaagagagctcgcttggtgatgggttaggtgaaggg
tatgggatgcttggtcagggtgggagcaagaggctgcgagtttccagtgttccgagcaag
ctgaaacttggtgctaagctggaaaagaagcttaaagaaagacagtatacaagtggtgtt
gctactacaggcacttctggtttcatgacatcaagacttgctttcactcctgtgcaggga
atagagctgtgcaatcctggggctgtgaaattaggtagtgggactcagagcacttacttc
tcagagtcaggaaccttctccaagatcaagaagatataa
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