Brassica napus (rape): 106378423
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Entry
106378423 CDS
T04128
Name
(RefSeq) ubiquitin-like modifier-activating enzyme atg7
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
bna
Brassica napus (rape)
Pathway
bna04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
106378423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106378423
04121 Ubiquitin system [BR:
bna04121
]
106378423
03029 Mitochondrial biogenesis [BR:
bna03029
]
106378423
Membrane trafficking [BR:
bna04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
106378423
Atg8 conjugation proteins
106378423
Ubiquitin system [BR:
bna04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
106378423
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106378423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG7_N
ThiF
Shikimate_DH
Motif
Other DBs
NCBI-GeneID:
106378423
NCBI-ProteinID:
XP_013674004
LinkDB
All DBs
Position
C2:44327978..44331462
Genome browser
AA seq
688 aa
AA seq
DB search
MILQFAPLNSSVDEGFWHSFSSLKLDKLGIDDSPISITGFYAPCSHPQVSNHLTLLSSES
LPSSSDEQSSTENTIHGNRNKCPVPGTLYNTNTVESFTKLDKQSLLKSEANKIWEDIQSG
KALEDCALLSRFLVISFADLKKWSFRYWFAFPALVLDPPASLVELKPASEYFTSEEAESV
SAACNEWRDSSLTTDVPFFLVSVSSDDSKATITPLKDWEACQGDHHKLLFGFYDPCHLPS
NPGWPLRNYLALIRSKWNLETVWFFCYRESRGFADMSLSLVGQASITLSSDSSVPNSVGW
ELNKGKRAPRSISLANSMDPTRLAVSACDLNLKLMRWRALPSLDLNVLSSVKCLLLGAGT
LGCQVARTLMGWGIRNITFVDYGKVAMSNPVRQSLYTFEDCVGRGEFKAVAAVKSLKQIF
PAVESSGVVMAIPMPGHPISSQEEESVLGDCKRLRDLIESHDAVFLLTDTRESRWLPSLL
CANANKIAINAALGFDSYMVMRHGAGPNSLSDDMQNLDINKTGRQRLGCYFCNDVVAPQD
SMTDRTLDQQCTVTRPGLAPIAGALAVELLVGVLQHPLGIYAKGDNSSSSNGGNSDESPL
GILPHQIRGSVSQFSQITLLGQASNSCTACSETVVSEYREKGNSFILEAINHPTYLEDLT
GLTELKKAANSFSLDWEDDGDDDEAVDM
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgatacttcaattcgctccattgaacagctccgtcgacgaaggtttctggcacagcttt
tcctctctgaaactcgataagctcggaatcgacgattctccgatctccatcacgggtttc
tatgcaccgtgttctcatccacaagtctcaaaccatctgactcttctttcttcagagtca
ttgccttcttcttcagatgaacagtcatcgaccgagaatactattcacgggaataggaac
aagtgtcctgttccagggactctctacaacaccaacaccgtcgaaagctttactaaactc
gacaaacaaagcttgttaaaatcagaagcaaacaagatttgggaagatattcaatcggga
aaggctctcgaggactgtgctttgttatctagattcctcgttatctcgttcgctgacctt
aagaagtggagtttccgttattggtttgcgttccctgcacttgttcttgatcctcctgca
agtttggttgaattaaagccagcttcggagtattttacttcagaagaagcagaatcagta
tctgctgcgtgtaatgagtggcgtgactcaagtttaacaactgatgttccattctttttg
gtttcggtttcgtctgatgattcaaaagctaccatcacacctcttaaagactgggaagcc
tgccaaggtgatcatcataagttacttttcggtttctatgacccgtgtcaccttcctagt
aaccctggctggccacttcggaattatctagcacttattcgctcaaagtggaacctcgag
actgtttggttcttctgctacagagagagccgcggtttcgctgacatgagcctttctctt
gttggtcaagcctccattacactctcatctgattcatctgtacctaactcagtgggatgg
gagcttaacaaaggaaaacgagctcccagatccattagccttgctaactccatggatcca
accaggttggctgtttctgcttgtgatttaaacttgaagttaatgagatggcgtgcgtta
ccgtctctagacttaaacgttctgtcctctgtcaaatgccttcttcttggagctggtaca
ttgggttgccaagttgctcgtactcttatgggttgggggatccgcaacataacctttgtt
gattacggcaaagtagctatgtctaatccagtcagacaatctctctacacgtttgaagac
tgtgttggtcgtggcgagttcaaagccgttgctgctgttaaaagccttaaacagatcttt
ccagcagtggaatctagtggagttgttatggctataccgatgcctggacatcccatctct
agccaagaagaagaatctgttctcggtgattgcaaacgccttcgtgatttgattgagtct
catgatgcagtgttcttgttgactgatacaagagaaagcaggtggctaccttctcttctt
tgtgctaacgctaataagattgctataaacgcggctttaggtttcgacagctacatggta
atgcgccatggtgctggccccaactcgttgtctgatgatatgcagaatcttgatattaac
aagacaggaagacagagacttggttgttatttctgtaacgacgttgttgcacctcaagat
tcaatgactgatcggacactggaccagcaatgcactgttacacgcccagggctagctcct
attgcaggagctttagccgttgaactcttagtcggagttctacaacacccacttggtatc
tatgcaaaaggagacaactcgagttcgagtaatggaggaaactccgatgaatcacctctc
gggatcttacctcatcagattagaggctcagtttctcagttctcacagatcacactgctc
ggacaagcctccaacagctgcacagcttgttctgaaactgtggtgtcagagtatagagaa
aaaggaaacagtttcatacttgaagctattaaccatcctacatacctggaggatcttacc
ggtttaaccgagcttaagaaagctgctaattcgtttagcctcgattgggaagacgatggt
gatgacgatgaagctgtagatatgtaa
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