Brassica napus (rape): 106379267
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Entry
106379267 CDS
T04128
Name
(RefSeq) probable pectinesterase/pectinesterase inhibitor 39
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
bna
Brassica napus (rape)
Pathway
bna00040
Pentose and glucuronate interconversions
bna01100
Metabolic pathways
Module
bna_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106379267
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
106379267
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Motif
Pfam:
Pectinesterase
PMEI
Pect-lyase_RHGA_epim
TrfA
ArgoL1
Motif
Other DBs
NCBI-GeneID:
106379267
NCBI-ProteinID:
XP_048625446
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Position
C9:complement(105487..108037)
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AA seq
522 aa
AA seq
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MHNPSRKTSKHINLNLLALTFHLIFLIPTVHSRSTQRLAEPNNITELIVATLNQTILNVN
VSYTTFYNLQKRLGPNIARRYRCAFEDCLGLLDDTIFDLETAISKLQTSSLGAHDVNMLL
SDAMTNQDTCLEGFKTSGIHEKNSDNTYKLTDSLKDSILKISSNLSNSLGMLQKIPGHEL
SPEAYEVDVEFPSWVLENDKRRLHAPVEKTKFNLMVAQDGTGNFTTINDAVSAAPTSSVT
RFMIYIKRGVYFENVEIPKNKTIIMFVGDGIGRTVIKANRRKGNLGTFQTATVGVKGEGF
IAKDISFVNFAGPSPQAVALRSGSDHSAFYRCSFEGYQDTLYVYSGKQFYRECDIYGTVD
FICGNAAAVFQNCSLFARKPNPGQKIVYTAQSRTCPNQSTGISMINCRFLAAPDLIPVKG
SFEAYLGRPWKNFSRTIIMKSFIDDLVVPAGWLEWNGNFALETLHYGEYMNEGPGSNITN
RVKWPGYRPILNETEATQFTVGPFIDGGTWLNSTGIPFNTGL
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgcataatccaagtagaaaaacgtcaaaacacataaatctcaacttactagcattgacc
tttcacctaatcttcttaatacccaccgttcattcacgatccacccagcgtctagccgaa
cccaataacatcactgagctcatcgtcgctactttaaaccaaactatcttaaacgtcaat
gtctcttacactaccttctacaacctccaaaaacgtcttggtccaaacatagctcgccgt
taccgctgcgcattcgaagactgtctcggtctactcgatgacactatcttcgatcttgaa
actgcaatctccaagctccaaacttcttctcttggggcccacgatgtcaatatgttgctc
agcgacgccatgacgaaccaagacacgtgtctcgagggtttcaagacaagtggaattcat
gaaaaaaatagtgataacacgtataaattgactgatagcttgaaggatagcatcttaaag
atctctagcaacctcagtaactctctgggcatgcttcagaagattccaggacatgaactc
tccccggaagcgtatgaggttgacgttgagttcccgagttgggtcttagagaatgacaag
agacgccttcacgctccggtggaaaaaactaagtttaatctcatggtggctcaagatggt
accggaaacttcactaccatcaacgatgcggtctcggccgctcctacctcgagtgtaaca
aggtttatgatatatataaaacgtggggtatactttgagaacgttgagataccgaagaat
aagacaataataatgtttgtgggagacggtatcggaagaacagtcataaaagcaaaccgc
aggaagggtaacttgggaacatttcaaactgctaccgtaggcgtgaaaggtgaagggttc
atagctaaggatatatcattcgtgaattttgctggaccgtcaccacaagccgtggcattg
cgaagcggctctgaccactctgctttctaccgttgctcgttcgaaggctaccaagacact
ctttatgtctattcaggcaaacagttctacagagaatgtgatatatatggtacggtcgat
ttcatatgtggtaacgcggctgctgtgttccaaaactgtagtctttttgctcgtaaacca
aatcctgggcagaaaatcgtatacaccgctcaaagtcgcacttgtccgaaccagtctact
ggtatctctatgattaactgtagattcttggccgctcctgatttgatccctgtaaaagga
agcttcgaggcgtacttaggtcgaccgtggaaaaacttctctaggactatcatcatgaaa
tcgtttattgacgatctggttgttcctgccggatggttggagtggaacggaaattttgct
cttgaaaccctacattatggagagtacatgaatgaaggacctggatcaaacattacaaac
cgggtcaaatggcctggctatagacccatactaaacgaaacggaagcaacccaattcaca
gtcggtccatttattgatggtgggacgtggcttaattcaaccggcatcccatttaatacc
ggtttgtaa
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