KEGG   Brassica napus (rape): 106379447
Entry
106379447         CDS       T04128                                 
Name
(RefSeq) sm-like protein LSM8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
bna  Brassica napus (rape)
Pathway
bna03018  RNA degradation
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106379447
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106379447
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bna03019]
    106379447
   03041 Spliceosome [BR:bna03041]
    106379447
Messenger RNA biogenesis [BR:bna03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106379447
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     106379447
Spliceosome [BR:bna03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    106379447
SSDB
Motif
Pfam: LSM TSNR_N M11L
Other DBs
NCBI-GeneID: 106379447
NCBI-ProteinID: XP_013674852
UniProt: A0A078FPL4
LinkDB
Position
A2:complement(7917063..7919213)
AA seq 98 aa
MATTTGLESLVDQIISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLG
LYIIRGDNIGVIGELDEELDASLDFSKLRAHPLKPVVH
NT seq 297 nt   +upstreamnt  +downstreamnt
atggcaacaactactggacttgagtctcttgtcgatcagatcatttcggttattacaaac
gatggacgcaacattgtgggagttctcaaaggttttgaccaggcgactaatataattctg
gatgaatctcatgaacgcgtcttttccacaaaggaaggagtacaacaacttgtgttgggt
ttgtacattatcagaggcgacaacataggtgttattggggagctagacgaagagctcgat
gctagtctggacttttcgaaactaagagctcatcctttgaaacccgtcgtgcattga

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