Brassica napus (rape): 106380457
Help
Entry
106380457 CDS
T04128
Name
(RefSeq) putative UDP-arabinose 4-epimerase 4
KO
K12448
UDP-arabinose 4-epimerase [EC:
5.1.3.5
]
Organism
bna
Brassica napus (rape)
Pathway
bna00520
Amino sugar and nucleotide sugar metabolism
bna01100
Metabolic pathways
bna01250
Biosynthesis of nucleotide sugars
Module
bna_M00997
UDP-Xyl/L-Ara biosynthesis, UDP-Glc => UDP-Xyl => UDP-L-Ala
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
106380457
Enzymes [BR:
bna01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.5 UDP-arabinose 4-epimerase
106380457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_10
NAD_binding_4
adh_short
KR
NmrA
DAO
RrnaAD
Motif
Other DBs
NCBI-GeneID:
106380457
NCBI-ProteinID:
XP_013675674
UniProt:
A0A078IKC4
LinkDB
All DBs
Position
C7:31993937..31997132
Genome browser
AA seq
412 aa
AA seq
DB search
MTSLSGVRSQRKNSKPLSPGDMDYIESKTKSNLMGKLLLLASLIILAFIVINKASSFTSP
SVFSRREEGVTHVLVTGGAGYIGSHAALRLLKDKYRVTIVDNLSRGNLGAVKVLQRLFPQ
TGRLQFIYADLGDPAAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVL
EAMARHKLKKLIYSSTCATYGEPEKMPITEDTPQVPINPYGKAKKMAEDMILDFSKNSDM
AVMILRYFNVIGSDPGGRLGEAPRPELRDQGRISGACFDAARGFIPGLQVKGTDYKTSDG
TCIRDYIDVTDLVDAHVKALEKAQPHKVGIYNVGTGKGRSVKEFVEACKKATGVEIKVDL
LPRRPGDYAEVYSDPTKILRDLNWTARFTNLQDSLQVAWRWQKIHPHGYASS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtttgtctggagtcagaagtcaacgaaaaaactcaaaacctctgtctccagga
gatatggattacatagaatccaaaacaaagagcaatcttatgggaaagcttctcttacta
gcttcacttataatcttagcctttattgtgatcaataaagcttcaagtttcacatcccca
agcgtgttctctcgaagagaggaaggagtgactcatgtgttagtcactggtggagctggc
tatatcggttcacatgcggctttaaggctgcttaaagataaataccgcgtaaccattgtg
gacaacctttcccgtgggaaccttggtgcggttaaggttttacagcgactgttcccacaa
actggaagactccaattcatttatgctgatttaggagatcccgcagctgtggagaaaata
ttctcagagaatgcctttgacgctgtgatgcattttgctgccgtagcttatgttggagaa
agcactctttatcctctaaaatattaccataacattacatcaaacacattaggagttctt
gaagctatggctagacataaattgaagaaactgatatattctagtacttgtgctacttat
ggagagcctgaaaaaatgccgattactgaagataccccgcaggttccgattaatccttac
gggaaagctaaaaagatggcagaggacatgatcttggatttctctaagaactctgacatg
gctgttatgatcttgagatacttcaatgtgattggttcagatccaggaggtagattagga
gaagctccaagacccgaacttcgtgaccagggacgtatctccggtgcttgttttgatgcc
gctcgcggtttcattcccggactgcaagtgaaaggaacagactacaaaacatcagacggg
acttgcattagagattatatagatgttactgacctcgtggatgctcacgtaaaggctctt
gagaaagctcagcctcataaagtcggtatctacaacgttggaaccggaaaaggaagatca
gttaaggaatttgtggaggcgtgtaagaaggcgacaggagttgagattaaagtagattta
ctgccccgacggccaggagattacgcagaggtttatagtgatccaacaaagattttgaga
gatttgaattggactgctcgattcactaatcttcaggatagtcttcaagttgcttggagg
tggcaaaagattcatcctcatggatatgcttcttcttaa
DBGET
integrated database retrieval system
