Brassica napus (rape): 106380503
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Entry
106380503 CDS
T04128
Name
(RefSeq) ribonuclease TUDOR 1 isoform X1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
bna
Brassica napus (rape)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
HycH
Motif
Other DBs
NCBI-GeneID:
106380503
NCBI-ProteinID:
XP_048603097
LinkDB
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Position
A2:complement(244604..250691)
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AA seq
988 aa
AA seq
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MASATENQWLKGRVKAVTSGDCLVITALTHNRPGAPPEKTITLSSLMAPKMARRGGKDEP
FAWESKEFLRKLCIGKEVAFKVDYKVEAIAGREFGSVFLGNQNLAKVVVQNGWAKVREQG
QQSQGKVSPYIVELLQLQEQAKQEGFGCFSKVPGAAEASIRDLPPSAIGDAGGFDAMGLL
AANKGKPMEGVVEQVRDGSTIRVYLLPEFQFVQVFVAGIQSPSMGRRNTNGNVVETVPDE
SNNGDASGESRGPLTSAQRLAASAASSGEVSADPFGAEAKYFTEHRVLSRDVRIVLEGVD
KFNNLIGSVHYSDGEVVKDLGLELVENGLAKYVEWSANMMEEEAKRKLKAAELQCKKDRV
KMWASYVPPATNSKALHDQNFTGKVVEVVSGDCVVVADDAIPYGSPAAERRVNLSSIRCP
KMGNPRREEKPAPYAREAREFLRQRLIGKQVIVQMEYSRKVTPAEGATTTADRIMDFGSV
FIPSPSKGDTEEVATASAISGTQPAGVNIAELLLSRGFGNVVRHRDFEERSNHYDALLAA
ESRALSGKKGIHSAKEAPAMHITDLTVAAAKKAKDFLPSLQRIRRIPAVVEYVLSGHRCK
LYIPKLTCSIAFAFSGVRCPGRGEPFSDEAISVMRRRIMQRDVEIEVETVDRTGTFLGSM
WEGRTNVATVLLEAGLAKMQTSFGADRIVEAHILEQAERTAKNQKLKIWENYVEGQEVSN
GSTTVETRQKETLKVAVTEVLGGGRFYVQSVGDQRIASIQNQLASLSVKDAPIIGSFNPK
RGDIVLAQFSLDNSWNRAMIVSAPREAIQSPDEKLEVFYIDYGNQELVPYSAIRPVDPSV
SSAPGLAQLCRLAYIKVPSLEEDFGPEAGEYLHTVTLGSGKEFKAVIEERDTSGGKVKGQ
GTGTELAVTLIAADEEISVNAAMLQEGIAKMEKRRRFEHKDKQAALDALEKFQEEARKAR
TGIWQYGDVESDDEDTAPARKPAGGGRR
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagcgactgagaaccaatggctcaaaggaagagtgaaggctgtaacctccgga
gactgtttagtgatcaccgctttgacccacaacagacctggagctccaccggaaaagacc
atcactctttcttctctcatggcacctaagatggctcgtaggggaggtaaagatgagcct
tttgcatgggagagcaaggagtttctgaggaaactctgcattggaaaggaagttgctttc
aaagtggattacaaagtggaagctattgctggaagagagtttggttctgtcttcctcggt
aaccagaatctagcaaaggttgttgttcaaaatggttgggcaaaggttagggagcaaggt
cagcagagtcagggcaaagttagtccttacattgtagagctgctacagctccaagagcag
gctaagcaagaaggctttggttgtttcagcaaggttcctggtgctgctgaggcatctatc
agagaccttcctccttctgccattggagatgctggaggctttgatgcaatggggcttcta
gctgctaacaaaggcaagcctatggaaggtgttgtggagcaagtacgcgatgggagtact
attcgtgtttatctccttccagagttccagtttgtgcaagtctttgttgctggaatccag
tctccatcaatgggaagaagaaacacaaacggaaacgttgttgagacggttcctgatgag
tctaacaatggagatgcctcgggtgagtcaagaggtcctctgacgtcagctcagagactt
gctgcctctgcagcatcttccggtgaggtttctgctgatccatttggagctgaggccaag
tacttcaccgagcatcgtgttcttagcagagatgttcggattgttcttgaaggtgttgac
aagttcaacaacctgattggttcagtccattactctgatggagaagtagttaaagacttg
ggtttggagctcgttgaaaatggtcttgctaaatacgttgaatggagtgctaacatgatg
gaggaagaagccaagaggaagctgaaagctgctgaactccaatgcaagaaagatcgtgtg
aagatgtgggcaagctatgttcctccagctacaaactctaaggcacttcatgaccagaac
tttaccggaaaggtagtggaagtggtgagtggagactgtgttgtagttgctgatgatgct
atcccatacgggagcccggctgcagagagacgtgtcaatctttcgagtatcagatgtcct
aaaatgggtaacccacgtagagaggagaagccagctccttatgctagggaagctagagag
tttctgaggcaaaggcttattggcaaacaggtcattgttcaaatggaatactcaagaaaa
gtcacaccagcagaaggtgctaccacaactgcagataggataatggacttcggctcagtg
ttcattccatctccctccaaaggcgacaccgaggaagtagctactgcatcagccatctcc
ggcactcagccagctggagtcaacatcgctgagcttctcctgtcacgtggtttcggaaac
gtggtcagacacagagactttgaagagaggtcaaaccattacgatgctcttctcgctgct
gaatctcgcgctctctctggaaagaaaggaatccattctgctaaagaggctccagccatg
cacatcactgacttaaccgtggccgcggccaagaaagctaaagatttcttgccgtcgctt
cagaggatcaggaggatacctgctgttgtggaatatgtactgagtggacatcggtgtaag
ctttatattccaaagctgacgtgtagcattgcctttgcgttctctggtgttagatgccct
ggacgtggagagcctttctcggatgaagctatctctgtgatgaggcgtaggatcatgcag
agggatgttgagattgaagttgaaacggtggatagaaccggtactttcctaggatcaatg
tgggaggggaggacaaacgtggcgacggttctgcttgaagctggtttagccaagatgcag
actagctttggtgcagacaggattgttgaagcgcatattcttgagcaggcagagagaact
gctaagaatcagaaactgaagatttgggaaaattatgttgaaggacaagaagtctcaaac
ggaagtacaaccgtggagactaggcagaaggagactttgaaggttgctgttacagaagta
cttggaggtggtcggttctatgttcaatctgttggagatcagaggatagcttctattcag
aaccagcttgcttctctgagtgttaaagatgctccaatcattggatcctttaaccccaag
agaggtgacattgtgcttgcacagtttagccttgacaactcctggaaccgtgcaatgatt
gtgagtgcaccccgagaagctattcagtcaccagatgagaagcttgaagtgttctacata
gattatggaaaccaagagttagtcccttacagcgcaatccgaccagttgatccttctgtg
tcctcagcaccagggctagctcagctatgcagacttgcctacataaaggttccaagcttg
gaggaagactttggtcctgaagctggagagtatttgcataccgtgacgcttggaagtggt
aaagagttcaaggcagtgatagaggaaagagacacgtctggtggtaaagtcaaaggccaa
ggcactggaactgaacttgctgtcactctcattgctgctgatgaagagatctctgtcaac
gctgcaatgcttcaggaaggaatagcgaaaatggagaaacgtaggagatttgagcacaag
gacaagcaagctgctcttgatgctttggagaagttccaggaggaagctcgcaaggctagg
actgggatctggcagtacggtgacgtggaatcagatgatgaggacactgctccggctagg
aagcctgctggtggtggtcgcaggtaa
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