Brassica napus (rape): 106380585
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Entry
106380585 CDS
T04128
Name
(RefSeq) RNA-binding protein BRN1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106380585
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
106380585
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
BRAP2
RBD_DGKtheta
Motif
Other DBs
NCBI-GeneID:
106380585
NCBI-ProteinID:
XP_013675828
UniProt:
A0A816KN60
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All DBs
Position
C2:complement(32922059..32925006)
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AA seq
436 aa
AA seq
DB search
MAEENREKNEGGEEEESVKVFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKFTRASRG
CCFVICPSREEADKLVNACHNKKTLPGAASLLQVKYADGELERLEHKLFVGMLPKNVSEA
ELLSLFSKHGTIKDLQILRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLV
VKWADTERERHTRRLQKAQSHLTRLATADPTNPSLFGALPMSYAPPYNGYGYHQAPGTYG
YMLPPIQNQAPLPNLGNSNALQRTSPDSVPPRLARRNFPLPPANYMGSGYPPVRGLPYPL
AHPRGIMNPRPLSSSPGSISPGGSTPLGIGLSSVVQSQTEGPEGANLFIYNIPREYGDQE
LAAAFQPYGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNAIDMMNGRHLGGKKLKVQL
KRDDNNNNNNKGQQSS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaaaatagggagaagaatgaaggaggagaagaagaagagagcgttaaggtt
ttcgtgggacaaataccgaaacacatgtcggaatctcaactccttacattgtttcaagag
ttcgctgttgtcgacgaggttaacatcattaaggacaagttcacacgcgcctctcgagga
tgttgttttgtaatatgtccatcgagagaggaagcagataagctggtcaatgcttgtcat
aacaagaagacattacctggtgcagccagtctattgcaagtaaagtatgcagatggcgaa
ctggaaaggctagagcacaagctttttgtcggtatgcttccaaagaatgtctctgaagct
gaacttctatcgttattctccaagcacggcaccataaaggatctacagattctaagaggt
gctcaacaaacaagcaaaggctgtgcttttctcaagtatgagacaaaagaacaagctgtt
tctgccatggaatccatcaatggaaaacacaaaatggagggttcaactgttcctttagtt
gtcaaatgggcagacacagaaagggagagacacacaagaagacttcaaaaggctcaatct
cacctcactcgattagctaccgctgatccaacaaacccctcattatttggagcattaccc
atgagctatgctccaccatataatggatatggttaccaccaagctcctggaacttatggc
tacatgctaccaccaattcagaaccaagctccattacccaatctaggtaatagcaacgcg
ctgcaaagaacctcacctgactctgtgccacctcgcttggcccgtaggaactttcctttg
cctccagcaaactacatgggctctggctatccccctgtgagaggtctcccttatccattg
gctcatcctagagggattatgaatcctcgccctctaagtagctctcctggatccatatca
cctggcgggtcaacacctttaggaatcggtttgagttccgtggttcaatctcaaaccgaa
ggtccagaaggtgcgaatctgtttatctataacatacctcgtgaatatggggatcaagaa
ctcgctgctgcgtttcaaccttacggtattgttctgagcgctaaggtgtttgtagacaaa
gccactggtgtaagcaaatgttttggttttgttagttatgactcacaagcagctgctcag
aacgctattgacatgatgaacggtcgccatttaggcggtaagaaattgaaagtccagctt
aagagagacgacaacaacaacaacaacaacaaaggccaacagagtagttaa
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