Brassica napus (rape): 106380601
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Entry
106380601 CDS
T04128
Name
(RefSeq) RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106380601
Transcription machinery [BR:
bna03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
106380601
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Motif
Other DBs
NCBI-GeneID:
106380601
NCBI-ProteinID:
XP_013675845
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Position
C4:36850467..36853413
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AA seq
564 aa
AA seq
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MASFNSFPIPKQIVRSSSSSSSASRPRILVRSSMASTNSMLVFVPPHPLIKHWLSLLRCG
QTPPLPFFVRIASRWSFLSSLKEDTTFHLRDHPLKACGCASATAENVYVELKDPKEYIGV
GVVGEQMSSSSSEKVNLSRSMLQYNLLGKNLLALEQTFVALESLRMERDIMLQMRKLGAT
ELFNTCLSRSRASSTTSCLPDTGTPELVDTTEEQQTFVPSTRKLRKKARRSSLMTGNDDQ
GSRTTWEGIDVPRVRKPSKYRKKRERISRNEAEMSQGVKIVADMERIRTKLEEESGKVAS
MSCWAEAAGMNEKLLMRNLHFGWYCRDELVKCTRSLVLFLARNYRGLGIAHEDLIQAGYV
GVLQGAERFDHTRGYKFSTYVQYWIRKSMSMMVSRHARGVHIPASIIRTMSQIQKARKTL
KTSQGIKYPADEEISKLTGYSLKKIRAANQCLKVVGSIDKKVGDCFTTKFLEFTPDTTME
SPEEAVMRQSARREVHNLIEGLEAREKQVMVLRYGLQDYRPKSLEEIGKLLRVSKEGIRK
IERRAMAKLRDQPKADNLRYYLNQ
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccttcaattcgttcccaattcccaaacagatcgttcgttcttcttcttcttct
tcgtctgcctctcggccacgtatcttggtgcgatcgagtatggcctcaaccaatagtatg
ctggtctttgtacctccgcatcctttgatcaaacattggctctctctcctgagatgtggc
caaactcctcctctccccttcttcgttagaattgcatcgaggtggtcgttcctttcctca
ctcaaagaggataccacatttcacctgagagatcatcctctaaaagcttgtggctgtgct
tctgccactgctgaaaacgtctatgtagagctcaaagatccaaaggaatatattggcgtg
ggtgtcgttggagaacaaatgtcttcttcttcttcagagaaagtcaatttgtctcgtagc
atgttgcaatacaacttactagggaagaaccttttagcactagagcaaacttttgtcgcc
ttggagtctttaagaatggaaagagatattatgttgcaaatgcggaagttgggggctact
gagttattcaatacctgtctatctaggtcccgagcttcgtcaaccacttcatgcttacct
gacacaggaacacctgagttggtggatactacagaagaacagcaaacctttgtgccttca
acaaggaaactgagaaagaaagcaagacggtcgagtttgatgactgggaatgatgatcag
ggttcaagaaccacttgggagggtattgatgtccctagagtgagaaaaccatcaaaatat
agaaagaaaagagagaggatttctagaaacgaggctgagatgtcacaaggagtcaagata
gtggcggacatggagaggatcagaacgaaactggaagaggaaagtggcaaggtagcgagt
atgagttgttgggctgaagcagcagggatgaacgagaaacttctcatgcgcaatctgcat
ttcggttggtactgtagagatgaactggtgaaatgcacccggtctttggttctcttcctc
gccagaaactatcgtggactcgggatcgcccacgaagatttgattcaggcagggtatgtg
ggagtgttgcaaggagcagagaggtttgatcacacaaggggttacaagttttcgacatat
gtgcagtattggataagaaaatcgatgtccatgatggtgtcacggcatgcaagaggcgtc
catattcctgcgtcaataatccgaactatgagtcagatacagaaggctcgcaagacgttg
aaaacgagccaggggataaagtatccggctgatgaggagatttcgaaactaacaggctac
tccttaaagaagattagagcagctaaccaatgcctaaaagtggttggttcaatcgacaag
aaagttggggattgctttaccacaaagttcttggagtttacaccagacacgacgatggag
agtccagaggaggctgtgatgaggcagagcgcaaggagagaggtacataatctaatagaa
gggctagaggctagagagaagcaagtgatggttctacgttatggtcttcaagactacagg
cccaagtccttggaagagattgggaagctgcttagggttagcaaagaagggattcggaag
atcgaacggagagcgatggctaaactcagagaccaacccaaagccgacaacctcagatat
tatttgaaccagtga
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