KEGG   Brassica napus (rape): 106380639
Entry
106380639         CDS       T04128                                 
Name
(RefSeq) serine hydroxymethyltransferase 4-like
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
bna  Brassica napus (rape)
Pathway
bna00260  Glycine, serine and threonine metabolism
bna00460  Cyanoamino acid metabolism
bna00630  Glyoxylate and dicarboxylate metabolism
bna00670  One carbon pool by folate
bna01100  Metabolic pathways
bna01110  Biosynthesis of secondary metabolites
bna01200  Carbon metabolism
bna01230  Biosynthesis of amino acids
bna01240  Biosynthesis of cofactors
bna04981  Folate transport and metabolism
Module
bna_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    106380639
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    106380639
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    106380639
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    106380639
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    106380639
Enzymes [BR:bna01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     106380639
SSDB
Motif
Pfam: SHMT Beta_elim_lyase Aminotran_1_2
Other DBs
NCBI-GeneID: 106380639
NCBI-ProteinID: XP_013675897
UniProt: A0A816K0J7
LinkDB
Position
C4:39853981..39856293
AA seq 471 aa
MDPVSAWGNTPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
EGMPGNRYYGGNEFIDQIENLCQSRALEAFRLDSASWGVNVQPYSGSPANFAAYTALLQP
HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKAMDF
RPKLLICGGSAYPRDWDYARLRAVADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
TTHKSLRGPRAGMIFYRKGPKPPKKGQAEGAVYDFEDKINFAVFPALQGGPHNHQIGALA
VALKQANTPGFKVYAKQVKANAVALANYLMGKGYSIVTGGTENHLVLWDLRPLGLTGNKV
EKLCDLCNITLNKNAVFGDSSALAPGGVRIGTPAMTSRGLVEKDFEMIGEFLSRSVTLTL
NIQKEHGKLLKDFNKGLVNNKEIEELKADVEKFSASYEMPGFLMSAMKYQD
NT seq 1416 nt   +upstreamnt  +downstreamnt
atggatccagtctcagcctggggaaacacccctcttgtcaccgtcgatccagagatccac
gatctcatcgaaaaggagaagcgtcgtcaatgccgcggaatcgaactcatcgcctccgag
aacttcacttccttcgccgtcatcgaagctctcggaagcgcactcaccaacaaatactcc
gaaggcatgcctggcaaccgttactacggaggtaacgagttcatcgaccagatcgagaat
ctctgccagtcacgcgctctcgaagccttccgtctcgattccgcatcatggggcgtcaat
gttcagccctactccggatctccggccaatttcgccgcctacaccgccttgcttcagcct
cacgatcgtatcatgggcctcgatctaccttcaggtggtcatctgacgcatggatactat
acgtccggtgggaagaagatctctgctacttcgatttactttgagagccttccgtataag
gtcaacttcaccactggttacattgattacgataagctcgaggagaaggccatggatttc
aggcctaagttgctcatctgtggtggtagtgcctaccctagggattgggattacgctaga
ttgagagctgttgctgataaggttggagctctcttgctctgtgacatggctcacatcagt
ggactcgttgctgctcaggaagctgcaaacccgtttgagtactgtgacgttgtgacaacc
acaacccacaagagtttgaggggtccaagggctggtatgatcttctacaggaagggccca
aaaccaccaaagaagggacaagccgagggtgcagtctatgactttgaggacaaaatcaac
tttgctgtgttccctgcgcttcaaggtggtcctcacaaccaccagatcggtgctctagct
gttgcgttgaagcaggctaatactcctggtttcaaggtctatgcgaaacaggtgaaagcc
aatgctgttgcccttgcaaactacctgatgggtaagggatacagtatcgtaaccggtgga
actgagaaccaccttgttctttgggatcttcgccctcttggattgaccggtaacaaggtt
gagaagctttgcgatctgtgcaacattactttgaacaagaatgctgtctttggagacagc
agtgctcttgctcctggaggtgtaagaatcggtactcctgcgatgacatcaaggggattg
gtggagaaggactttgagatgataggagagttcttgagccgatcagtgacactgacattg
aacatccagaaggagcatggtaaactgttgaaggacttcaacaagggtttggtgaacaac
aaagagatcgaggagctcaaggctgatgtcgagaagttctcagcctcctatgagatgcct
ggattcctcatgtctgcgatgaagtaccaggattag

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