Brassica napus (rape): 106380683
Help
Entry
106380683 CDS
T04128
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY2 isoform X1
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106380683
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106380683
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106380683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-RING_5
zf-C3HC4
zf-C3HC4_3
DUF2921
zf-ANAPC11
zf-RING_16
zf-RING_UBOX
PHD_NSD
zf_RING_Vps8
zf-RING_Vps41
Prok-RING_4
zf_RING_Vps8_fungal
IBR_1
Motif
Other DBs
NCBI-GeneID:
106380683
NCBI-ProteinID:
XP_013675946
UniProt:
A0A078JB80
LinkDB
All DBs
Position
C7:265609..269404
Genome browser
AA seq
556 aa
AA seq
DB search
MKKSNLGLGFFLCLLSILVTQQANGLRPIRDTSRSSWGDQWLFGKKEVSSGPFSPWNITG
TYRGTWKFQDTVNSSSKFPDFRNQNGNSVIELVTSPTKITGVHYVQGAVVFHDVFDNEHN
VRGAQIKVEGVYIWPFRQLRLVANSGKNGDSGLEDDYLLSNPYHLLGIFSSQVLQESPRD
RIMSKQKASPIHEMEKHCNIEIAAQISRASSTQNSGDKDYFHIEGLMESPAVDDDGDCFS
PLLLNATSINVEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSIVMIGQQ
AIMDSYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKATRPSNSGEGW
ETMRRELSFLYSRFYGILLGGILIMYELHNYMRWILLVMYSFWIPQIVANVVRDSRKPLH
PYYILGMTVTRLAIPLYVFGCPKNFMRVEASKAWCIGLCAFIGFQAAVLLLQHYFGSRCF
VPRKMLPEKYNYYRRLDHDVNRSRDCVICMATIDLRRRTNDCMVTPCEHLFHSGCLQRWM
DIKMECPTCRRTLPPA
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtcgaatttgggattagggtttttcttgtgcttattatcgattctggttacg
caacaagccaatggactcagacccatcagagacacctctcgatcatcctggggcgatcag
tggctctttggtaaaaaagaagtaagcagcggaccattttccccttggaatataacagga
acttacagaggcacctggaagtttcaagatactgtaaatagctcttccaagttccctgac
ttccgtaatcaaaatggcaactctgtcatcgagttagtcactagtcctactaagattact
ggtgtccactatgttcagggtgctgttgttttccatgacgtttttgacaatgaacacaat
gttcgcggtgcccaaattaaagtcgaaggtgtttatatctggcccttccgtcagctccgt
cttgttgctaacagcggaaagaatggtgattcaggcctcgaagacgattatcttctctcc
aacccctatcatctgctcggcattttttcctctcaagtacttcaagaatctccaagagac
agaataatgtcgaaacaaaaggcttctccaatacatgagatggagaagcattgtaatatc
gaaatagcagctcagatatcccgagcctcttctactcaaaacagtggagacaaagattat
tttcacattgaaggattgatggaaagtcctgcagtagatgacgacggagattgcttctcc
cccttgttgctcaatgcaacctccattaacgttgaagtctactacaacaaagctgtcaac
tatacactgatggtcacttttgtctccttcctccaggttcttttgttgatacggcaaatg
gagcacagtaacacacaatctggtgctgcaaaggtctccattgtaatgatcgggcagcaa
gccatcatggattcttatctatgccttttacatcttacagccgggatattagttgaatca
ttatttaacgcgtttgcaacagcagcgttcttcaaattcgtagtgttctcgatatttgag
atgagatatcttctggccatatggaaagcaacccggccttcaaacagcggtgagggctgg
gagacaatgaggcgtgagctctcctttctctacagccgtttctatggaatcctacttgga
ggcatattgataatgtatgagctccacaactacatgcggtggatcctccttgtcatgtac
tcattttggattccgcagatagttgcaaacgttgttcgtgattctagaaagcctctgcac
ccttattatatcttggggatgacggttacacggcttgccataccgctgtatgtatttgga
tgccccaagaacttcatgcgtgtagaggccagcaaggcctggtgtataggcctgtgcgcg
ttcatcgggtttcaagctgctgttcttcttcttcagcattatttcgggtcgcgttgcttt
gttcctcggaagatgctacctgagaaatacaactactacagacgattggatcatgatgta
aacagaagcagggactgcgtaatctgcatggccacaattgatctcaggaggcgcactaat
gattgcatggtaacgccgtgcgagcatttattccactcgggatgcttacagagatggatg
gacataaagatggagtgcccaacatgtcgtcgcacacttcctccagcttaa
DBGET
integrated database retrieval system
