Brassica napus (rape): 106380884
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Entry
106380884 CDS
T04128
Name
(RefSeq) syntaxin-125
KO
K08486
syntaxin 1B/2/3
Organism
bna
Brassica napus (rape)
Pathway
bna04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
106380884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106380884
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106380884
Membrane trafficking [BR:
bna04131
]
SNARE
Syntaxin (Qa)
Stx-PM
106380884
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
106380884
Exosomal proteins of other body fluids (saliva and urine)
106380884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
DUF7201
COG6_N
Treslin_STD
Erp_C
STX6_10_61_N
CD225
HTH_25
LMBR1
DUF6261
CCDC-167
PNMA
Spectrin_SYNE1
DUF1664
Motif
Other DBs
NCBI-GeneID:
106380884
NCBI-ProteinID:
XP_013676179
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All DBs
Position
A6:4350130..4351525
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AA seq
298 aa
AA seq
DB search
MNDLFSNSFKRNQAQMSDVEAGQETMNLDKFFEDVENVKDDMKGVETLYKKLQDSNEECQ
TVHNAKKVKELRAKMDADVGQVLKRVKIIKQKLEALEKANANSRNVPGCGPGSSTDRTRS
SVVSGLGKKLKDLMDSFQSLRARMNDEYKETVERRYFTITGEKADEQTIDNLIASGESEN
FLQKAIQEQGRGEIMDTISEIQERHDAVKEIEKNLLELHQVFLDMAALVEAQGQQLNNIE
SHVAKASSFVRRGTDQLQDAREYQKSSRKWTCYAIILFIVVFILLLIPVMPHIMLMLK
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacttattctcaaattcgttcaagcggaaccaggctcaaatgagcgatgtggaa
gcaggtcaagaaacgatgaacctcgacaaattcttcgaggacgttgagaatgtgaaggat
gacatgaaaggagtggagactctttataagaagcttcaagactccaacgaagaatgccag
accgtgcacaatgccaagaaggtgaaggagctacgagctaagatggatgctgacgtgggt
caggtccttaagagggtcaaaatcattaagcagaagctcgaagccctagagaaagccaac
gctaatagccgtaatgtcccgggttgtgggcccggttcgtctactgataggactcggtct
tctgtggttagcggtctcgggaagaagttgaaggacttgatggatagtttccagagtcta
cgtgcgcgaatgaacgatgagtataaggaaaccgtagagcgcaggtatttcacaataaca
ggagaaaaagcggacgagcaaacaattgataacttgattgcaagcggtgagagtgaaaat
tttctccaaaaagcgattcaagagcaaggaagaggtgagatcatggacacgatatctgag
atccaggaaagacatgatgcagtgaaggagatagagaagaatctacttgagctgcaccaa
gttttcttggacatggcggctttagtagaagcacaagggcaacagctgaacaatatagag
agccatgtggcaaaggctagctcgtttgtgagaagagggaccgatcagctccaagacgcg
agggaataccaaaagagctcgaggaaatggacttgttatgccatcattctcttcatcgtt
gtctttatccttcttcttattcccgttatgccccatattatgctcatgctgaaatga
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