Brassica napus (rape): 106381103
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Entry
106381103 CDS
T04128
Name
(RefSeq) U-box domain-containing protein 12
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Pathway
bna04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
106381103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106381103
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106381103
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
U-box type E3
106381103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
zf-RING_UBOX
MLKL_N
zf-C3HC4_4
zf-C3HC4_2
zf-Nse
Neurochondrin
zf-RING_2
KAP
Arm_2
zf-C3HC4
zf-rbx1
Peripla_BP_1
Motif
Other DBs
NCBI-GeneID:
106381103
NCBI-ProteinID:
XP_013676419
UniProt:
A0A816K4Y9
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All DBs
Position
C4:complement(53040868..53044655)
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AA seq
653 aa
AA seq
DB search
MAKTELAKILIESVKEIASISDHRPPMKIHCAHLSRRLKLLLPMLEEIRDCKNSLPEESM
MKALLSLRESLLHAKDLLIYISQVSKIYLVLERDQVMVRFQKVTALLEQALSEIPYQSLE
ISDELQEQVELVLVQLRRSIGKGRGEKYDDELYKDLLSLYDGATDSEILRRVAEKLQLMT
VTDLTEESLALLDMLSTSGGDDPGESFEKMMMLLKNIKDFVQTYNPNLDDVPLRSKPSLS
KAQDEDEKNVPEDFRCPISLKLISDPVIVSSGQTYDRECIKKWLEEGNTTCPKTQVTLTS
DTVTPNYALRSLIAQWCESNGIEPPKRPNNPQPSSKASSSSSSSTSFSPPSDEQLKIEAL
LCKLTSQRPEEQRSAAGEIRLLAKQNNHNRVVLAASGAIPLLVSLLMNFDDPRTQEHAVT
SILNLSIFQENKGRIISTFGAVPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGAA
GAIPPLVNLLSEGSQRGKKDAGTALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPEGRMVD
EALAILAILSSHPEGKVVVGAADAVAFMVDFIRSGSPRNKENAAAVLVQLCSWDPQYLIE
AEKLGVMGCLIEMAENGTDRGKRKAAQLLNCFSRFNEQQKQSGLGVEDQVSLI
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaacagagctagcaaagatcttaatcgaatcagtaaaagagatcgcttcgatt
tcagatcaccgtccaccgatgaagatacactgcgcccatctctcccggcgattaaagctc
ctccttcccatgttggaagagatcagagactgcaaaaactctctccctgaagaatcgatg
atgaaggctttgctatctctcagagaatcgctcctccatgccaaggatctgcttatttat
ataagccaagtcagcaagatttacctggtgttggagagagaccaagtcatggttagattc
cagaaagtgacagctttgttagaacaagcattgagtgagattccttaccagagtcttgaa
atttcagatgagcttcaagaacaggttgagcttgttctagttcagttaagaagatcgatt
ggcaaaggccgcggcgagaagtacgatgacgagctgtataaagaccttctatctctttac
gacggtgcaacagactctgagatcctcaggagagtggctgagaagcttcaactgatgact
gtaaccgaccttacggaagagtctttggctttacttgacatgcttagtaccagcggcggt
gacgatcctggcgaaagctttgagaagatgatgatgcttctcaagaatatcaaggacttt
gtgcaaacttataatcctaacttggatgacgttccattgagatcaaaaccgtcgctttct
aaggcacaagatgaagatgagaagaatgttcctgaagatttccgctgtccgatttcgctc
aagttgattagtgatcctgtcattgtttcttcagggcagacatatgatcgtgaatgcatt
aagaaatggctagaagaaggaaacaccacgtgtccaaagactcaagtaacgctaacaagc
gacaccgtcacaccgaactatgctctaagaagccttatagctcaatggtgtgaatccaat
ggcatcgaacctccaaaacgtcccaacaatcctcaaccgagtagtaaagcctcctcctcc
tcttcctcttcgacttccttctcacctccttctgatgaacagttgaagatcgaagcactc
ctatgtaagctcacttcacaacgccccgaagagcaaagatccgccgcaggagaaatccgc
ctcctagcaaaacagaacaaccataaccgagtcgtcctcgctgcatcaggcgccattcct
cttctagtgagtctcctcatgaacttcgatgacccccggacgcaagaacacgccgtgacg
tcgatccttaacctctcgatatttcaagagaacaaaggaaggatcatctctacgtttgga
gcggttccggggatcgttcaagtgctcaagaaaggaagcatggaagctagagaaaacgcg
gcggctacacttttcagcctctcggttatagacgagaacaaagtgacgataggcgcggct
ggagccatccctccgcttgtgaacttgctgagcgaagggtcacagagaggcaagaaagat
gcagggactgctctgttcaatctctgtatatttcaagggaacaaagggaaagctgtgagg
gccggtttagttccggtgctaatgcggttactaacagaaccggagggaagaatggtcgat
gaagcattagctatattggctatactatcgagtcatcctgaagggaaagtagtggttgga
gcggctgatgctgttgcctttatggttgattttattagaagcgggtcgccgcggaacaaa
gagaacgcagctgcggtgttagtccagttgtgttcatgggatccgcagtatttgattgaa
gctgagaagttaggggtaatggggtgtttaatagaaatggctgagaatggtactgacaga
gggaagcgcaaagcggcacagttacttaactgctttagccgttttaatgaacagcagaag
cagtctggtttgggtgtagaagatcaagtctctctgatctga
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