Brassica napus (rape): 106381338
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Entry
106381338 CDS
T04128
Name
(RefSeq) PHD finger protein MALE MEIOCYTE DEATH 1
KO
K26271
PHD finger protein MS1/MMD1
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106381338
Transcription factors [BR:
bna03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
106381338
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GFIT
Motif
Pfam:
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
106381338
NCBI-ProteinID:
XP_013676697
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Position
A2:complement(8006325..8008896)
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AA seq
720 aa
AA seq
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MPLPIMDTCRKRKRKPSVYSLQRLGEEEFPISRSGSFRDNVRVFLRDFAEVEEYNVRGSP
VWCTLLSHEAKNTVIPLYTIEEDVVRSSEPYCDHCRCTGWSNHFVSKRKYHFIIPVDAEW
DLPLEDDVFDLQTHLLHGLIHTNGFGHLICVNGLEGGSRYLCGREMVDLWDRICTNLGAR
MITVEDLSKKRSLDLRLLYGVAYGHSWFGRWGYKFCRGSYGVTKNDYENAIELLGSLELD
QIEFDFGEHRQFKRIKQVFRHYKEMSEGHLKTFKDLLRFILIIKSHAPRKNKLHSAPPPT
LSTDSPLKKRSNRLFMKKSDAVESEKSQGYRSYSTVAANLGSRWPVRRLEYAAEVIVEAL
KEMKVLKQSGMTRQDVRDSARLHIGDTGLLDYVLKSMNNVIVGNALVQRYVDPLTRILHY
TIQELDDATKLVEQKKDAVIEAVPLRVVSESKAGGHVHGDLLLLYTNVLLNYPKSESVRS
AAQVVLDSKHFVKEWPLWDNDDKIFRFVCRINNPSLIDLRTEQVTELPPGELVTVSLQAT
VFDLKQAIEETFRDTYCILTNFEVNEIDELKEDDDDDSNLLFGKLEPCSALTVRGDGIDL
ESTLKFQGGSDTWMVKCVCRARDDDGERMISCDVCEVWQHTRCCGIDDSDTLPPLYVCSS
CCDEFAEQQKRVLQPKYEFQNPGQMLMLGAADDYFAEEDEGCLGMMMFPSESFVSEQFIL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttccgataatggacacatgccggaagcgaaagcggaagccgagcgtgtacagt
ctccaacgactgggagaagaagagttcccaattagccggagcgggagcttccgagacaac
gtcagggtttttctccgggacttcgcggaggtcgaggagtataacgtccgcggatcgccg
gtttggtgtacgctcctcagccacgaagcgaagaacactgtgattcctctgtatacaatc
gaagaagacgttgttcgatcctcggagccttactgcgatcactgcaggtgtacaggatgg
agcaatcactttgtgtcaaaacgaaagtatcattttatcataccggttgatgctgagtgg
gatttgcctctagaggatgatgtattcgatctgcagactcatcttttgcatggactgatt
cacactaatgggtttggtcatttgatctgcgtcaatggtctggaaggagggtccagatac
ttgtgcggaagagaaatggttgatctttgggatcgaatttgtaccaaccttggagcaagg
atgataactgttgaggatttgtcaaagaagagatctttggatcttcggttgttgtacggt
gtggcttatggacactcgtggtttgggagatggggatacaagttctgtcgtgggagctac
ggtgtgaccaagaatgattacgagaatgctatagagcttctcggttcccttgagcttgat
cagattgagtttgattttggagagcatagacaattcaaacggatcaaacaggttttccgg
cactacaaagaaatgagtgaagggcatttgaagacattcaaggatctcttgcggtttatc
ctcatcatcaagtctcatgctcctcgaaagaacaagcttcactctgctcctcctcctact
ctctcaactgattctcctctgaagaagagatcaaacaggttgtttatgaagaaaagcgat
gccgtggagagtgagaagtctcaggggtaccggagttacagcactgtggcagctaatttg
ggaagtagatggcctgtgagaagactggagtacgctgctgaagtaatcgtggaggcacta
aaagagatgaaagtactgaagcagagtggtatgactcggcaagatgttagggactcagct
agattgcatattggagatacgggtctgctagactacgtgctgaagtcgatgaacaatgtg
attgttgggaatgctttggttcaacgatacgtggatcctcttacaaggattcttcactac
acaatacaggagcttgatgatgctaccaaactggtggaacagaagaaagatgctgtgata
gaggcggttcctttgagggttgtcagtgaatcaaaagccggaggtcatgttcatggagat
ctgttgttactatacacaaacgtgctcttgaactatccaaagtccgagtcagtgagatct
gcagctcaagtagtcctagacagcaaacacttcgtaaaggagtggcctctatgggacaac
gatgacaaaatcttccggtttgtttgtcgtatcaataacccaagtttgattgatttgaga
acagaacaggtcacagagctgcctccaggtgagctagtcacagtctcgttacaagccaca
gtctttgatctaaagcaagccatcgaagaaactttcagagacacttactgcatcttgaca
aactttgaggtgaacgagatcgatgagcttaaggaagatgatgatgatgatagcaacttg
ctgtttggaaaactcgagccttgctctgctttgactgtgagaggagatgggattgatttg
gaatcaacgctcaagttccaaggtggaagcgacacatggatggtgaagtgtgtttgcaga
gctagagatgacgatggggagaggatgatttcgtgtgatgtctgtgaggtttggcagcac
acaagatgctgtggaattgatgattcagatactttgcctccactttatgtttgttcgagt
tgctgtgatgaatttgcagagcagcagaagagagttttgcagcccaagtacgagtttcag
aatcctggtcagatgttgatgcttggagcagcggatgattacttcgccgaagaagatgag
ggatgtcttggaatgatgatgtttccttcagaaagtttcgttagtgaacagttcattttg
taa
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