Brassica napus (rape): 106381562
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Entry
106381562 CDS
T04128
Name
(RefSeq) nuclear pore complex protein NUP96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106381562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106381562
03036 Chromosome and associated proteins [BR:
bna03036
]
106381562
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106381562
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106381562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
106381562
NCBI-ProteinID:
XP_013676928
LinkDB
All DBs
Position
C2:complement(29514594..29519143)
Genome browser
AA seq
1029 aa
AA seq
DB search
MASLSIVQAPEISTMATSLDSHRKILFDGNDISDSLPSLNSPDYFLKPSTNELVQREIES
PGFCSRVPDFTVGRIGYGLIKFIGTTDVRKLDLDQIVQFQRHEVVVYDDESSKPAVGEGL
NKSAEVTLIVNMACGEERADHVSYKLKQIAERQGATFISFDPEMGFWKFLVPHFSRFGLS
DDEAEDITMDDAPRLENHLGLNGDMVVADVDKMETSESELSHSLPAHLGLDPGKMKEMRL
LMFPREDLDESEDFGDQTSFPMTSLTKRNARPSQKHSQRNTHQDTPPVVRKTPLALLEYN
HGNDKSSPGSILMVQQNKNLAVRKSKMGGFELDISHETPLTDNYSRNVVDAALFMGRSFR
AGWGPNGLLLHTGNPIGSSSSQRVLSSVISVDKIAIDKVVRDKKEKIQKELIDSAFETPL
SLHKELYHEEEKEVRFGSFSLKLQKVVTDRVVLSDICRNYIDIIEKQLEFPGLSTSAKLF
LTHQVMVWELIKVLFSERQSTYAASDNEEDMMQDVKEESAEVDTEALPLIRRAEFSCWLQ
ECVSHRVQEDVSDLNGSGYLKHLFFLLTGRELDSAVELAISKGDVRLACLLSQVGGSTVN
RDDIMQQLHLWGRNGLDFNYIEKDRIKLYELLAGNIHDALQDFEIDWKRFLGLLMWHHLA
PDSSLPVIFRNYQLLLDQGKAPWPVPIYIDEGPADGIVSNTKHSDLLYYLMLLHSREEQK
IGFLKTMFSAFSSTDDPLDYHMIWHQRGILEAVGAFTSDDLHALDMGFVAQLLSQGLCHW
AIYVVLHMPYRKDRPYLHFTVIREILFQFCETWSSVESQRQFIKDLGIPSEWMHEALAVY
YNYHGDFVTALDHFIECANWQRAHSIFMTSVAHSLFLSANHSEIWRIATSMDDRKSEIEN
WDLGAGIYMSFYLLKSSLEEDADTMLELDSPESRNESCRSFVGRLNESLAVWGDRLPVEA
RVAYTKMAEEICELLLSGLSVYPDRDSQLSCFMTAFKAPLPEDVRSSHLQDAVSLFSLYL
SETGHQTSA
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctttctattgttcaagctccagagatttcaacgatggctacaagtttggac
tcacacagaaagatcctttttgatggaaatgatatcagtgattcattgccttccttgaac
tcacccgactacttcttgaagccatccacgaacgagctggtccagcgagaaattgaaagc
cctggattttgcagccgtgtccctgatttcactgttgggaggattggttacggtcttatc
aagtttattggaactacagatgttagaaagctagatctggatcagattgttcagtttcag
aggcacgaggtggttgtttatgatgatgagagctccaagcctgctgttggcgaggggctt
aacaagtctgctgaggtcactctgatcgttaacatggcttgtggggaagagcgggctgac
catgtttcttataaattaaaacagattgctgaaagacaaggggcaactttcatctcattt
gatcctgagatgggtttctggaagtttttggttcctcatttcagtagatttgggttgagt
gatgatgaggcagaagatattactatggatgatgccccacgtttggagaatcatctagga
ctgaatggtgacatggtggtagctgacgttgacaaaatggaaacttccgagtctgagctt
tctcattctcttccagcgcatctaggacttgatcctggaaagatgaaagaaatgagattg
ctgatgtttcctagggaagatcttgacgaaagtgaggattttggagatcaaacttccttc
cccatgacatcattgactaaacgaaacgcaagaccttcacagaaacattctcaaagaaat
actcatcaagatactccaccggttgtgcggaaaacgccgcttgctttgctggagtataac
catggtaatgataaaagctccccaggcagcatcctgatggtccaacaaaataagaacctg
gcagtcagaaagtcgaagatgggaggtttcgagctggacatcagtcatgagacgccatta
actgataactattcccgcaatgttgtagatgcagcattattcatgggaaggtcgttccgt
gcaggttggggaccaaatggcctccttcttcacactggtaatccaataggcagttctagt
tcccagagagtattgtcttctgtgatcagtgtagataagatagcaattgacaaagtggtt
cgggataaaaaggaaaaaattcagaaagaacttatcgactctgcatttgagactccctta
agtctccacaaggaattgtatcatgaagaagaaaaagaagtcaggtttggctctttcagt
cttaaacttcagaaagttgtcactgatcgtgtggttctttcagatatctgccgaaactat
attgatataatcgagaaacagctggagtttcctgggttgtccacctctgcgaagctcttt
ttgactcaccaggtcatggtgtgggaactcataaaagttctcttttctgagagacagagt
acttatgcagcttctgataatgaggaagacatgatgcaagatgtcaaagaagagtctgcg
gaagttgatacagaagctcttccacttatccgaagagcagaattcagttgctggctccaa
gaatgtgtcagtcaccgtgtacaagaagacgtgagcgatctgaatggttctggctacctt
aagcacttgttctttcttctaacgggacgagagcttgattcagctgtggaacttgccata
tctaagggagatgttagacttgcttgtttgttgagccaggttggtggatcaactgtaaac
cgcgatgatatcatgcagcagcttcacctttggggaaggaatgggctcgattttaactac
attgaaaaggatagaattaagctttacgaattgcttgctggtaacatccacgatgcacta
caagattttgaaattgactggaagagattcctagggttgttgatgtggcatcatctggct
ccagacagttccttgcctgtcatcttcagaaattatcaactcctactagatcagggaaag
gctccgtggccagtcccaatatatatcgacgaaggaccagcagatggaattgtaagcaac
accaagcattctgacctgttgtattatcttatgcttttgcacagcagagaagagcaaaaa
attggttttctgaagactatgttcagtgccttctcttcaactgacgacccacttgactat
catatgatctggcaccagcgaggaatattagaagcagttggagctttcacttcagatgac
cttcatgctctcgatatgggatttgttgcacagcttctctctcagggcctttgtcattgg
gctatctacgttgttcttcacatgccctaccgcaaagaccgtccatatctacacttcact
gtcattcgggaaatcctgtttcagttctgtgaaacttggagttctgtggaatcacagcgg
caatttataaaggacttgggtatcccttctgaatggatgcacgaagctctggcagtttat
tacaattaccatggagatttcgtaacggctctcgaccactttatcgaatgcgctaactgg
caaagagctcattccatttttatgacatcagttgctcattcattgtttttgtcagctaac
cactcagaaatatggagaattgctacttcaatggacgaccgcaagtctgagattgaaaac
tgggacctgggtgctggaatttacatgtcattttatttactaaagagttcactggaagaa
gatgcggatacaatgctagaactggattcccctgagagcagaaacgagtcgtgcagaagt
tttgtcggtcgtttaaacgagtcattggctgtttggggtgatagattacctgttgaagcc
agagtcgcatacacaaagatggcagaggaaatctgcgagttgcttctatcaggtctgagt
gtgtatcctgatagagactctcagctaagctgttttatgacagccttcaaagctccatta
ccagaagatgtaagatcatcacatctgcaagatgctgtctctctcttctctctatatctc
tcagagacaggtcaccaaacatcagcttag
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integrated database retrieval system
