Brassica napus (rape): 106381969
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Entry
106381969 CDS
T04128
Name
(RefSeq) dual-specificity RNA methyltransferase RlmN isoform X1
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106381969
Enzymes [BR:
bna01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
106381969
Ribosome biogenesis [BR:
bna03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
106381969
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Radical_SAM_2
DUF5703
RlmN_N
DUF2789
Motif
Other DBs
NCBI-GeneID:
106381969
NCBI-ProteinID:
XP_013677363
UniProt:
A0A816NUP6
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All DBs
Position
A9:10748541..10750711
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AA seq
460 aa
AA seq
DB search
MVSLSTTMRRLGIITVTNSAVVTPTLISSTASFARNLTLPSPLRNHGLTNSIRFLKSRSL
LSSLSCFSSSAAYLPALDEFPSTKVGSVAMRDDKKKVILKGMSYASLQEWVESHGFRPGQ
AMMLWKRLYKDNIWAENVDQLEGLNKDFKRMISEHAEFGALSFKDVRSASDGTRKILFTL
DDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTAAEIVEQAVYARR
LLSHEVGSITNVVFMGMGEPFHNIDNVIKAANIMVDENGLHFSPRKVTVSTSGLVPQLKR
FLRECNCALAVSLNATTDEVRNWIMPINRKYKLSLLLETLREELSSRHKYKVLFEYVMLA
GVNDSMEDAKRLVELVQGIPCKINLIQFNPHSGSQFIQTDEDKMIKFRNVLAEGGCTVLM
RFSRGNDQMAACGQLGMLGAIQAPVMRVPEQFRTALKASV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggttagtctgtcgacgacaatgaggcggctgggaatcatcaccgtcactaattccgcc
gtcgtcactccgacgctaatctcttcgacggcgtctttcgctagaaacctgaccttaccc
tcgcccctccgcaatcacggccttaccaattccattcgtttcctcaaatcccgaagcctc
ctctcctccttgtcatgtttctcttcttcggcagcttatcttcccgcactcgacgagttc
ccatcaactaaagtaggttctgtagcaatgagagatgataagaagaaggtgatcttgaag
ggtatgagctacgcttcgctccaagaatgggttgaatcgcatgggtttcgacccggacaa
gctatgatgctgtggaagagactttacaaggataacatatgggcagaaaatgttgatcag
cttgaaggcctgaacaaagatttcaagagaatgattagtgagcatgccgagtttggggca
ttatctttcaaggatgttcgttcggcttcagatggaactaggaagattctgttcacgttg
gatgatgggcttgtgatcgagacagttgttataccttgtgatcgtggcaggacaactgtt
tgtgtttcgagccaagtgggttgtgccatgaattgtcagttctgctacaccggcaggatg
ggtttgaaaagaaatctcactgctgctgagatagttgagcaggctgtttacgcaaggcgg
ttgctttcccatgaagttgggtcaataacaaatgttgtgtttatgggaatgggagagcca
tttcacaatattgacaatgtcatcaaagctgcaaacataatggtagatgagaatggactt
cactttagtccacgcaaggtcacagtctccaccagtggccttgttcctcagctaaagcgt
ttccttcgtgaatgtaattgcgctttggcagtcagtcttaatgcaacaaccgatgaggtt
agaaactggattatgccgatcaacaggaaatacaagttatctttgctccttgagacgctc
agagaagaactcagttcaaggcacaagtacaaagtgttgttcgaatacgtgatgctcgct
ggagtgaatgacagcatggaagatgcaaagaggctagtggagcttgtgcagggaatccca
tgcaagattaaccttattcagttcaacccacatagtggttctcagttcatacagaccgat
gaagacaagatgatcaagttccgtaatgttctggctgaaggaggctgcactgttttaatg
cggtttagccgaggcaacgatcaaatggcagcgtgcgggcagcttggcatgcttggtgct
attcaagcaccagtgatgagggtgcctgagcagttccgcaccgctctaaaagcatctgtt
tga
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