Brassica napus (rape): 106382008
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Entry
106382008 CDS
T04128
Name
(RefSeq) proline--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
bna
Brassica napus (rape)
Pathway
bna00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106382008
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bna01007
]
106382008
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106382008
Enzymes [BR:
bna01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
106382008
Amino acid related enzymes [BR:
bna01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
106382008
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
106382008
Prokaryotic type
106382008
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Motif
Pfam:
tRNA-synt_2b
ProRS-C_1
HGTP_anticodon
DUF348
Motif
Other DBs
NCBI-GeneID:
106382008
NCBI-ProteinID:
XP_013677416
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Position
C9:40614509..40617471
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AA seq
547 aa
AA seq
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MVASLRLPSLTSLLFPATTRYPAALRRTVCLRNRPASGFASGTAASTDAHRLRSKQAVTP
RSQDFNAWYLDVIASAELADHGPVRGTMVIRPYGYAIWEAIQEYLNVKFKETGHSNMYFP
QFIPYSFIEKEASHVEGFSPELALVTVGGGSELEEKLVVRPTSETIVNHMFTQWIHSYRD
LPLMINQWVNVTRWEMRTKPFIRTLEFLWQEGHTAHATPEEAEKEVSSPYLLCAVLQAKQ
MIEIYTRFAFEQTAIPVIGGRKSKLETFAGADKTYTIEAMMGDRKALQAGTSHNLGQNFS
RAFGTQFQDENGERQHVWQTSWAVSTRFVGGIIMTHGDDTGLMLPPKIAPIQVVIVPIWK
KETEKTGVLSAASSVKEVLQAAGVRAKLDDTSERTAGWKFNFWEMKGVPIRIEIGPRDVS
SNCVVVSRRDIPGKAGKVFGISMEPSTLVAYVKEKLDEIQSSLLEKAVSFRDSNIVDVNS
YEELKVAISSGKWARGPWSASDSDEQRVKEETGATIRCFPFEQTQGIKTCLMTGNRAEEV
AIFAKSY
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggtggcttctctgagacttccttctctcacttccctcttgtttcccgctaccactcgc
taccccgcagctctccggcgaaccgtatgtcttcggaacaggcctgcttccggattcgcg
agtggcactgcggcttcgacggatgctcatcggctcaggtcgaagcaagccgtgacgcct
cggtcgcaggacttcaatgcgtggtacttggatgttatagcgagcgctgaactcgcggat
catggtccagttcgtggtactatggtcattcgtccctacggttacgccatctgggaagcg
attcaggagtatttgaatgtgaaattcaaagagactggtcatagcaacatgtacttccct
cagtttataccgtactcgtttattgagaaagaagcttcacacgttgagggatttagtccc
gaactagcccttgtcactgttggaggaggaagtgaacttgaagagaagcttgtggtccgg
cctaccagtgaaaccattgtgaatcacatgttcacccagtggattcacagctatcgtgat
cttcctctcatgatcaatcagtgggtcaatgtcactagatgggagatgcggacaaaacca
tttatcaggactcttgaatttctgtggcaagagggtcatactgctcatgccactcccgag
gaggcagagaaagaggtctcttctccatatttgctgtgtgctgtattgcaggcaaaacag
atgatcgaaatctacaccagatttgcttttgagcaaactgccatacctgttattggaggt
cgaaaatcaaagttggagacctttgctggtgctgataaaacctataccattgaggctatg
atgggagatcggaaggctttgcaggctggtaccagccacaacttaggacagaacttttct
cgtgcttttggaactcagttccaagatgagaatggagaaaggcaacatgtgtggcagaca
tcatgggcagtcagtacacgttttgtcggtggcattatcatgactcatggagatgacact
ggtcttatgcttcctcccaagatagctccaatacaggtagtaattgtacctatttggaaa
aaagagactgagaaaacaggagttctcagtgctgcatcatcagtgaaagaagttctccaa
gctgctggggttagagctaaacttgatgacacatcagaacgaaccgcaggatggaagttc
aatttctgggagatgaagggagtccctataaggattgaaattggtccacgcgatgtatct
agcaactgtgtagttgtctcgaggagggatataccgggaaaagcggggaaagtttttgga
atatcaatggagccgtcaacgttagtagcgtatgtaaaagagaagctggatgagatccaa
tcatcacttctagaaaaggctgtatcattcagagatagtaacatagtggatgtgaactcc
tacgaggagctcaaagttgctatatcttcagggaaatgggcacgaggtccatggtcagct
agtgactcggatgagcaaagggtaaaagaagaaacgggggcgaccattcggtgtttcccg
tttgaacagactcaagggatcaaaacatgtctgatgaccggaaatcgagcagaggaagtt
gcaatctttgccaagtcttactaa
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