Brassica napus (rape): 106382236
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Entry
106382236 CDS
T04128
Name
(RefSeq) protein HASTY 1
KO
K14289
exportin-5
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106382236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106382236
03036 Chromosome and associated proteins [BR:
bna03036
]
106382236
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
106382236
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
106382236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
UPF0154
Motif
Other DBs
NCBI-GeneID:
106382236
NCBI-ProteinID:
XP_013677684
LinkDB
All DBs
Position
A6:complement(23020402..23027761)
Genome browser
AA seq
1204 aa
AA seq
DB search
MDASNNSTASNVAQAILAVLDYNSTPDARRAAVAFLESVKSGDIRVLAHVSLLLVKKECS
SEIRLHAFKMLQHLVRLRWEELSPSERRDFAKVSVDLMSEIASPSEEWSLKSQSAALVAE
IVRREGPDLWQELFPSLTSLSAQGPLQAEVVSMMLRWLPEDITVHNEDLEGDRRRLLLRG
LTQSLPEILPLLYNLLERHFGAAMNEASRQQVDLAKQHGAVVIACLNAINAYAEWAPVLD
LSRYGIINGCGALLSSPDFRLHACDFFKLVCSRKRPSDVSGTEFDAAISSLFQSLMNVST
EFLYRSASCTSGIDESDYEFAECICESLVSLGSTNLQCIATDGGVLALYLQQMLGFFQHF
KLGLHFEAMIFWLALLRDLLTKPKAAANPGAEGVAVGGMQSSSQVDNEKKKILGLISDDV
ASTILDVSFQRMLKKEKVPPRIAPSLGPLELWSDEFEGKGDFGQYRSRLLDLVKFIASHK
PLVASTKISERIITLIKDLLASPVPLQDVAVLDSQQLAFDCIVATVFDGFSEFAGGSSDV
HFSLRGIFEGLLQQLLSLKLTEPELIKMHGHYLDAMGPFLKYFPDAVGNVISKLFEMLTS
LPHIVKDPATSTSRIARLQICTSFIRIAKTADKSVLPHMKSIADTMAYMQREGTLLRGEH
NILGEAFLVMASAAGAQQQQEVLAWLLEPLSQQWIQSEWQNCYLSDPMGLVRLCSNTPFM
WSLFHTVTFFEKALKRSGHRKSNLNTTSVTSQDLHPMAHHLSWMLPPLLKLLRVIHSLWS
PSVYQTLPPEMRAAMTMADVERYSLLGEAIPKFSKASSVYADGSFDGGKEGQSEANESDV
RNWLKGIRDSGYCVLGLSATIGDTFFKCLDANYVAVALMENLQSMEFRHMRQLIHSFVVY
VVKSCPADMWETWLEVLLHPLFIHCQKAISSSWASLMREGRAQVPDSFGVQNGPDMKLEV
MEEKLLRDQTREIANLLSTMASPGLNPGLPVLEHSGPVGRIDVSSPKDLLAFKSNSMVGF
LLNHKNVALPALQICLEVFTWTDGETTTKVCCFCGVVVLLAILTNNVELREFVSKDLFSA
VIRGLAMESNAVNSADLVNLCREIVIYLSDRDPAPRQVLLSLPCLTPNDLRAFEEAMGKT
PSPKEQKQLMRSLLLLGTGNNLRALAAQKTMNVITNVTLRTRGPASTSEAKEDEGETIGL
ASVL
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atggatgctagcaacaacagcacagctagcaacgtggctcaagcgattctcgccgtcctc
gattataactccactcccgatgctcgcagagccgccgttgcattcctcgaatctgttaaa
tctggagatatcagggttctagcacacgtttccttacttctagtgaagaaggaatgctct
tcagagatccgtctgcatgccttcaaaatgttacagcatctggttagactacggtgggaa
gaattaagcccctcagagcgcagggattttgctaaggtctctgttgacttaatgtcagag
atagctagtccatctgaggaatggtctctgaagagtcagtcagctgcccttgtagctgag
atagtcagaagagaaggccccgatctttggcaggagttgtttccttcactaacctccttg
tctgcacagggcccattacaagctgaagtggtctcgatgatgctcagatggcttcctgaa
gatattacagttcacaatgaggacttggaaggtgacaggcgtcggctactgttgcgggga
cttactcaatctttgcctgagattttacctttgttgtataatcttctcgagagacacttt
ggagctgcaatgaatgaagctagtaggcaacaagttgacttagcaaaacagcatggggct
gtggtcatagcttgtttgaatgccatcaatgcatatgccgaatgggctcctgttttagat
ctttctagatatggaatcattaacgggtgcggtgcacttctttcctctcctgacttccgt
cttcatgcttgtgattttttcaaacttgtctgctcaagaaaaagacccagtgatgtttct
ggtactgaattcgatgctgcgattagcagtctgtttcagagtctgatgaatgtctccaca
gagttcttatacagatcagcttcatgtacttcgggtatcgatgaaagtgattatgaattt
gctgagtgtatatgtgaaagcttggtttctttaggctcaacaaacctgcaatgtattgcg
actgatggtggtgtactggctctctaccttcaacagatgcttggtttctttcaacacttt
aagttgggtcttcactttgaagcaatgatcttctggctggcattactgagggatctactt
acaaagccaaaggctgctgccaatccaggcgcagagggagtagcagttggtggcatgcaa
agttcaagccaagttgataacgaaaagaaaaagattttaggtcttattagtgatgacgtt
gctagcacaattcttgatgtatctttccagcggatgctcaagaaagaaaaagtccctcct
cgaattgctccttctcttgggcctttagaactgtggagtgatgagttcgaaggaaaggga
gactttggccaataccgatcaaggcttttagacttggtcaagtttatcgcttctcacaag
cccctcgttgccagtactaaaatatctgaaaggattatcaccctcatcaaagatctgttg
gcttctccagtgcctcttcaggatgtggcagtgttggacagccagcaattggcttttgat
tgtattgtagcaacggtttttgatggattcagtgagtttgccggtggtagttctgatgtt
catttttcattgcgtggaatatttgagggcttgcttcagcagcttctctcattgaaattg
actgagccggaacttataaaaatgcacgggcattatctggatgcaatgggtccctttctc
aagtatttccccgatgcagttggaaatgtgatcagcaaattgtttgaaatgcttacctct
cttccacacattgtcaaggatccagcaactagtacttcaagaatcgcaagattgcagatt
tgcacgtcttttatacgtatagctaaaaccgctgataaaagtgttctgcctcacatgaag
tcgattgctgatacaatggcatatatgcaaagagagggaacgttactccgtggggagcat
aacattctgggtgaagcatttcttgttatggcttctgcagcaggagctcaacagcagcaa
gaagttcttgcttggttgctggagccattgagccaacagtggatccaatcagagtggcag
aattgctatctatcggaccctatgggtctggttcgtttgtgctccaacacccccttcatg
tggtccttgttccacaccgttacattctttgagaaggcactcaagagaagtggacataga
aaaagcaacttgaatacgacctcagtaacaagtcaagatttgcatcctatggctcatcat
ctttcttggatgttgccacctctcctaaaacttctccgtgttatccattccctttggtct
ccctcagtatatcaaacactacccccagagatgagggcagctatgacaatggctgatgtt
gagcgatacagtctccttggggaagcaattcctaaattttcaaaagcctcgtcggtttat
gctgatggatcttttgatggtggtaaagaaggacaatctgaggcaaacgaatctgatgtg
cgaaattggttgaaagggattcgagacagtggatactgtgtgttgggtctatcagcaaca
atcggagatacattcttcaaatgcctagatgccaactatgtcgcagtagcactcatggag
aacttacagtcaatggagttcaggcacatgcgacagcttattcattcctttgtagtttat
gtagtaaaatcttgtccggcagatatgtgggagacgtggcttgaagttctcctgcaccca
ctatttattcattgtcagaaagctatcagctcctcttgggccagtcttatgcgtgagggc
agagcacaagttccagattcgtttggtgtacaaaatgggccggacatgaaacttgaagta
atggaagagaaactgctgagggatcaaactagggagattgccaacctcctttcaacaatg
gcttctcctggtttaaaccccgggcttcctgttctggagcattcaggccctgtgggacgt
attgacgtgtcttctcccaaggatttgcttgcattcaaatccaactctatggttggcttc
ctcctgaatcacaaaaacgtggctctcccagctctgcaaatctgtttggaagtctttaca
tggacagatggggaaacaacaaccaaagtctgttgcttctgtggtgtggttgttctacta
gcgatcctgacaaataacgttgagctcagagaatttgtgtcaaaagatttgttttctgcg
gtcattagaggcttggccatggagtcaaatgccgttaacagtgctgatctagttaaccta
tgccgtgaaatagttatttatctctctgacagagacccagcccctcgccaggttttgctt
tcacttccttgtcttacacccaacgacttgcgtgctttcgaagaagctatggggaaaact
ccaagtcccaaagagcagaagcaactcatgaggagcttgttgctgttaggtacagggaac
aacttaagagcacttgctgcacagaaaaccatgaatgtcatcaccaacgtcactttaagg
actcgcggaccagcaagtacttctgaagctaaagaagacgaaggggaaacaatcgggctg
gcgagtgttttgtga
DBGET
integrated database retrieval system
