Brassica napus (rape): 106382275
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Entry
106382275 CDS
T04128
Name
(RefSeq) cytosolic endo-beta-N-acetylglucosaminidase 2-like isoform X1
KO
K01227
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:
3.2.1.96
]
Organism
bna
Brassica napus (rape)
Pathway
bna00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
106382275
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
106382275
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_85
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
106382275
NCBI-ProteinID:
XP_013677729
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Position
C1:complement(48411491..48414902)
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AA seq
714 aa
AA seq
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MRGDLLRAYFSRRTLVSLYNLFFTISRTLLTSFPLSLIMPNSNDGGADSESESVPLLDLS
KPSSPISFPIKSLQYLKSRSYFDSFHFQFNRSTVPLRRDLPNNRPRVLVCHDMKGGYVED
KWVQGCENDAGYAIWHWYLMDVFVYFSHSLVTLPPPCWTNTAHRHGVKVLGTFITEWDEG
KAACKEMLATKESAQMYAERLSELATSLGFDGWLINIENEIDKEQIPNLMEFVSHLTEVL
HLSTPGSLVIWYDSVTVHGHLKWQDHLNEKNKPFFDLCDGIFMNYTWKESYPKLSAEVAG
DRKYDVYMGIDVFGRGSFGGGQWTVNTALDLLKRNNVSAAIFAPGWVYETAQPPNFHTAQ
NKWWSLVEKSWGIVQTYPQALPFYSDFNQGFGNHVSLEGRQLSDAPWYNISCQSLQPLLE
FKEDNTDIIQVTIDTRDASYNGGGNIVFKGRLKGDVYFTARLFKPLLQLSSSPITVSYSV
KSDETCKLGLLLSFSSASHGTKSILVAPQEPIPRLDHMFLKCLVTSEQTVSEWTVHETSL
VMDEHTLTEISAFCYRTENSTKASEYVALLGHISIKDHVQLLQQNFVSLPPASSWVIEAH
NIELVPGNFGSKILRVKLEWKHKHLEDSGLPVYNVYAENVKSTGELRSRKVLEKPRSERV
FLGISHVPAYYVSELVVDSDVKGVSFVVQPCGEDGLWRKLDDSPNLLVDLEGLS
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggagacctacttcgcgcctatttctcacggagaacactcgtctctctctacaat
ctcttcttcaccatctcccgtacgctcctcacttcgttccctctctccctcatcatgccc
aattccaacgacggcggcgcagattccgagtccgagtccgtcccgctgctcgatctatcg
aaaccgtcatcaccgatctccttcccgatcaaatctctccaatatttaaaatcgcgttcc
tacttcgactctttccactttcagttcaaccgctccacagtccctctccggcgagactta
cctaataatcgcccgagggttttagtatgccacgatatgaagggagggtatgtagaagac
aagtgggtacaagggtgtgaaaacgacgccggatacgcgatttggcattggtatttgatg
gacgtgtttgtttacttctcccattctctggtgactcttcctcctccttgttggaccaat
acagctcatcggcatggtgttaaggtgttggggactttcatcacggaatgggatgaaggt
aaagctgcctgcaaagagatgcttgccactaaggagtctgctcagatgtatgctgagcgt
ttgtctgagcttgctacttctctaggtttcgatggatggctgataaatatagagaacgaa
atagataaagaacagattcctaatttgatggagttcgtcagccatctaacagaagtcttg
catttatccactcctgggtctttggttatatggtacgatagtgtcactgttcatggccat
cttaaatggcaagatcatttgaatgaaaagaacaaacctttctttgacttgtgtgatgga
atcttcatgaactatacatggaaggagagctacccaaaattatcagctgaagttgcaggt
gacagaaaatatgatgtttacatgggaattgatgtcttcggtcgcggctcctttggtggt
ggtcaatggactgttaatactgctcttgatttgcttaagagaaacaatgtatcggctgcc
attttcgctcctggatgggtatatgagactgcacaaccacctaattttcacacagctcag
aataagtggtggtcacttgttgagaagtcatggggaatagtccaaacatatccacaagcg
ttgccattttactcggatttcaatcagggctttggtaaccatgtatcactcgagggtcgc
cagttatctgatgctccgtggtacaacatttcttgccaaagtcttcagccactcctcgag
ttcaaggaagacaacactgatatcatacaggtcactattgatactagagatgcatcttat
aacggaggagggaacatcgtttttaaaggaagactcaagggagatgtgtatttcacagca
aggctctttaaacctctccttcaactttcttcttcccccatcacagtctcctactctgtg
aaatcagatgagacttgtaaacttggactcctgctttctttctcgtccgcatcacacggg
actaaatccatacttgtggcgccacaagaacccatccctagattagatcacatgttcttg
aagtgcctcgttacatcagagcagactgtatcagagtggacggtacacgagacaagcctt
gtcatggatgaacacacactaactgaaatctctgccttttgctacagaacagagaactcg
acgaaggcatcagagtacgttgcattgctcggtcacatttcaatcaaagatcatgttcag
ctcctccagcaaaacttcgtttccttacctccagcatcatcatgggtcatcgaggctcat
aacatagagcttgtaccgggtaacttcggttcaaagatcctcagggttaagctagaatgg
aaacataaacaccttgaagactctggtctcccagtgtacaatgtgtatgcagagaatgtg
aagtcaactggtgaactaagatcgaggaaggttttggagaaaccaagaagcgagagagtg
ttcctcggaatctctcacgtaccggcttattacgtatcggaactggtggtagattcggac
gtgaaaggggtcagcttcgtggtgcaaccgtgtggtgaagatgggttatggagaaagctt
gatgattcccctaaccttcttgtggacttggagggtctctcgtag
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