Brassica napus (rape): 106382324
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Entry
106382324 CDS
T04128
Name
(RefSeq) protein indeterminate-domain 6, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106382324
Transcription factors [BR:
bna03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106382324
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf-C2H2_4
zf-C2H2_STOP2_C
ACS_CODH_B_C
DUF7128
C2HC_ASCIZ
Motif
Other DBs
NCBI-GeneID:
106382324
NCBI-ProteinID:
XP_013677784
UniProt:
A0ABQ8CHB5
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Position
A8:complement(20902118..20905444)
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AA seq
470 aa
AA seq
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MSSSYNNSISSSSTQSFLLASAATGANNSNREETAMTMIQQPNSVAPLPPPKKRRNQPGN
PNPDAEVIALSPKTIMATNRFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQKSKQEVIRR
KVYLCPEPTCVHHDPSRALGDLTGIKKHYYRKHGEKKFKCEKCSKRYAVQSDWKAHSKTC
GTKEYRCDCGTIFSRRDSYITHRAFCDALIQESTRNPTVSFTAMAAAAGGGGSRPGFYGS
AASALSHNHFGNNSNTSFAPLAAGYNLNRSSTEKFEAFLPQSSNPNPGPTNFLMQCPSNQ
GFLSQNDQTLMNQHGLISLGDNINNNNNNNSLFNLGYFQDNTKNTDHTSVPSLFTNADNN
DPSALLRGLTSSSSSSAVVNEFGDSDNGNFQGLMNSLAATTDHQGRSGSSLFDLHFGNNL
SMGGSDRLTLDFLGVSGGNVSNVNGSGGRSGAPLDVDMKFPRPNNPFEKS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatcgtacaacaactcaatttcatcatcttccactcagtctttcctcctggcc
agcgccgccaccggagcaaacaactctaaccgtgaagagacggcgatgacgatgattcaa
caacccaactccgttgctccactaccaccacccaagaaacgaagaaaccaacccggaaac
ccaaatccagatgctgaagtgatagcgttatctccaaagacaataatggcgacgaacaga
ttcctatgtgaagtatgcaacaaagggtttcaaagagaacagaatctacagcttcaccgg
agaggacacaaccttccatggaagctgaaacaaaagtctaaacaagaagtgatcaggagg
aaggtgtatctgtgtccggagcccacgtgcgtccaccatgacccgtcacgtgctctcgga
gacctcaccggtatcaagaagcattattaccggaagcacggtgagaagaagtttaaatgc
gagaaatgctctaagcgttacgctgttcaatctgattggaaagctcactctaagacttgt
ggtaccaaagagtatcgctgtgactgtggtaccatcttctctagaagagatagttacatt
acgcatagggcgttctgtgatgcattaatacaggaatcaacaagaaaccctaccgtgagc
ttcacggcaatggcagcagctgctggtggaggtggcagtagacctggattttacggcagt
gctgcttctgctctctctcacaaccatttcggtaacaactcaaacactagttttgcccct
ctagctgcaggttacaatcttaaccgttcatctaccgaaaagtttgaagccttccttcct
cagtcctcaaaccctaatcccggtcctaccaattttctcatgcaatgcccttcgaaccaa
ggattcttgtcgcagaacgatcagacactcatgaaccagcacggtctgatcagcctcggt
gataacatcaacaacaacaacaataacaacagcttgttcaacctcggatactttcaagac
aacaccaagaacactgatcatacaagtgtcccttctcttttcaccaatgctgataacaac
gatccatctgctttgcttagagggttaacttcttcatcttcttcaagtgctgtcgttaat
gaatttggagatagtgataatggaaactttcaaggtctgatgaactctctagctgcgaca
acagatcatcaaggccggtccggtagcagtcttttcgaccttcattttggaaacaatctt
agcatgggaggctctgataggttgactttggactttcttggcgtcagtggaggcaatgtg
agcaacgtaaatggtagtggtggtcgtagtggagctcctttggacgttgatatgaagttt
ccacgtccaaataatccatttgaaaaatcttga
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