Brassica napus (rape): 106382531
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Entry
106382531 CDS
T04128
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase NSUN5
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106382531
Enzymes [BR:
bna01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
106382531
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Other ribosome biogenesis factors
106382531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Methyltransf_25
Ubie_methyltran
Methyltransf_31
FtsJ
PCMT
Methyltransf_4
ASPP2-like_RA
AcetylCoA_hydro
Transposase_29
RsmF-B_ferredox
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
106382531
NCBI-ProteinID:
XP_013678015
UniProt:
A0A078GI69
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All DBs
Position
C2:54331386..54334954
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AA seq
489 aa
AA seq
DB search
MARHKSNAPPKVTRQPRKQQQSSGAERSALYARREAAKVLHTVLRGDAERRAVASIKSLV
FSPSVRNKRGTFALVCETLKYLDVIKDVLGIANVLNSKWKRQEPLVYIICYDILFGKETP
SIGDAEKFLVRRKDALLSGLATLLVRKRVKSVEELLDHSQLNGHIKQRYVRVNTLKMDVD
SAVKELEKLYKVQKDETVPDLLVMPPGSDLHAHPLVMNGRIFLQGKGSSMVAAALQPEAG
WEVIDACSAPGNKTVHLASLMKGQGKIIACELNEERVKRLEQTIKLSGATNIEVFHGDFL
SLNPEDPSFAKVRAILLDPSCSGSGTITDRLDHLLPSHSADNTNYDSIRLHKLAVFQKKA
LAHALSFPQVERVVYSTCSIHQIENEDVVSSVLPLASSLGFKLATPFPQWQRRGLTVFAG
SEHLLRMDPVEDKEGFFIALFTKTNNLDNPKASELPEGECRRRRKRFYPFLWPKVFFRAW
NGRLHGSRR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcacaaatcaaacgcgccgccgaaagtcacacgacagccgcggaaacagcaa
caatcctccggcgccgagagatcagctttgtacgccaggagggaagctgccaaagtcctc
cacaccgttctccgaggcgacgcagagcgccgagccgtcgcttcgataaagtcactcgtc
ttcagcccttccgtacgcaacaaacgcggcaccttcgctctcgtctgcgagacgctaaag
tatcttgatgtgataaaggatgttcttggaatcgctaacgtgttgaatagcaaatggaag
aggcaagagccattggtctacatcatttgctatgatatccttttcggcaaggagactcca
tcgattggtgatgctgagaagtttcttgtgcggcgtaaagatgctctactctcaggtcta
gccacgcttctagtgaggaagagagttaaaagcgttgaagagttgttggatcattctcag
cttaatggtcatataaagcaacgttatgttcgtgtaaatacacttaagatggatgtagat
tcagcagtgaaggagctggagaaactgtataaggtgcagaaggatgagacagttcctgac
ttgttggtgatgccacctggcagcgatctgcatgctcatcctttggttatgaatgggcga
atatttttgcagggaaagggaagttcaatggtagcagcagcactgcagccagaagcagga
tgggaggttattgatgcctgttcagctccaggtaacaaaactgttcatcttgcttctctt
atgaaaggacaaggaaaaatcatagcgtgcgagctaaatgaagaacgagtaaagcgtttg
gaacagactattaagctgtctggtgctaccaatattgaagtctttcatggtgattttctg
agtctaaatccggaagatccttcttttgcaaaggttcgagctatattgttggatccttca
tgctctggctctggaaccattacagatcgtctggaccatctccttccttctcattcagca
gataacacgaactatgactccataagactccacaaactcgctgttttccagaagaaggct
ctggcccatgcactctcctttccacaggttgagagagtagtatacagcacatgctcaatc
caccagatagaaaacgaagatgtggtctcatctgtattacctctggcttcatccttgggc
ttcaaactcgctaccccttttcctcagtggcagcgtcgtggtctcactgtattcgctgga
tctgaacatttactcaggatggatccggttgaggacaaagaaggattcttcatcgctttg
ttcaccaagacaaacaaccttgataatccaaaagcgtctgagcttcctgaaggagagtgt
agacgaagacgcaaacggttttatccatttctttggcccaaagtgttcttcagagcttgg
aatgggaggttgcacgggtccaggaggtga
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