Brassica napus (rape): 106382546
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Entry
106382546 CDS
T04128
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
106382546
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106382546
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
106382546
Protein phosphatases and associated proteins [BR:
bna01009
]
HAD phosphatases
Fcp/Scp phosphatases
106382546
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
106382546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
106382546
NCBI-ProteinID:
XP_013678033
LinkDB
All DBs
Position
C2:54196116..54200201
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AA seq
823 aa
AA seq
DB search
MCSVVSDFSQSPPSVRFHSDLTNMSKDHQAIAINDAVHKIQLSLLNGITSQTHLFSARAL
MSQSDYEDVVTERTIAKLCGYPLCRSPLPSDDVSRRGKYRVSLKEHRVYDVRESQKFCSG
ECLVSSRAFEKSLQEVRTSEFDMVKLGGIVGLFGGGGGDVVEEEEGLGLGKLTICEKSDV
MSGGEVDLEEWMGPSSAVEGYVPVDRSNCKFKDGNKDSKATKNRQKKQEDPSFSEMGFTS
TVIVPDECSVSSYNSKQDSKAKNNQKKQADPPFNEMGFTSEVIIPDDCSVSKVPPQTKQT
PPVVKPEDGQGKTPKKSRFRREKEKEKIDFASFGFDAMGCASPVTASDGYSVEYSVSKQP
PSSTEDPLGGQMKDGLKPLDEKSSLSASKGKGFRPPPRRKQASLVGESSKGKTVVTITEK
DIQSSLVDEMGVMSDGYSVEYNVSKHPPSSMEDSLSSHLEGSQTLDKKNALLGSSSGSNT
KALGKKVISDSCEGLKAHKDMCSSSETVTKSCLKVSGFKKPSHSVTWADQSDGVRGDLCE
VRSDDIESGLNTEDVSRLALAEACAKALSQAAEAVSSGDLDASDAAAKAGIVLLPSTHQL
DEEVSEEEMSEEEEEEEATLLKWPNKPGTPDSDLFERDQSWFDETPEGFNLTLSPFAMMW
DSLFGWVSSSSLAYIYGKDESAHEEFLSVNGKEYPRRIRLGEGLSSEIKETIAGCLARAV
STVATVLKLPVPISELEKGLGSLLETLSLTGAVPSFRVEQWLVVVLLFLDALSVCRIPRI
APYILNRSKVLEGSGIGNEEYETMKEILLPLGRVPQFATLCGA
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcagtcgtttcagatttttcccaatctcctccgtcagttcgattccactccgac
cttacaaacatgtcgaaggatcaccaagcaatcgccatcaacgatgcggttcacaagatc
cagctctctctcctcaacggcatcacttcacaaacccacctcttctccgcaagggccctg
atgtcccagtcggactacgaagacgtcgtcacggagcgaaccatcgccaagctctgcggc
taccctctctgccgatcccccctcccttccgacgacgtttccaggagagggaagtaccgc
gtctccctgaaggagcacagggtctacgatgttcgggagagtcaaaagttctgctcgggg
gagtgtcttgttagtagcagagcgtttgagaagagtctgcaggaggttcgtacctcggag
tttgatatggtgaagcttggtgggattgttggtttgttcggtggtggtggtggggatgtg
gtggaagaggaggagggtttggggttggggaagttgactatttgtgagaagagtgatgtg
atgagtggtggggaggtggatttggaggagtggatgggtccttctagtgctgttgaaggt
tatgttcctgttgatcgaagcaattgcaaatttaaagatggcaataaggattccaaggct
actaagaatagacaaaagaagcaggaggatccgtcttttagcgagatgggttttactagc
acagttattgttcctgatgagtgtagtgtaagcagttacaactccaaacaggattccaag
gctaagaataatcaaaagaaacaggcggatccgccttttaacgagatgggtttcactagt
gaagttatcattcctgatgattgtagtgtttcaaaggttccaccacagaccaaacaaact
cctcctgtggtgaaacccgaggatggccaagggaaaaccccaaaaaaatcgaggtttcgt
cgtgaaaaggaaaaggaaaagatcgatttcgcgagctttgggtttgatgcaatgggctgt
gcgagccctgtcactgcaagtgatggatacagcgttgaatacagcgtgtctaagcagcca
ccatcttcaactgaagaccctcttggtggccaaatgaaagatggtctaaagcctttggat
gagaagagttctctatctgcgtctaaagggaaggggtttaggcctccaccacggcgcaaa
caagcttctcttgtaggcgaatcaagcaaagggaaaacagttgtaacaatcacggagaag
gacattcaaagttctctggttgatgagatgggtgtaatgagcgatggatacagtgtggaa
tataatgtgtctaagcatccaccatcttcaatggaagattctctaagttctcacctagaa
ggttctcagacgttagacaagaaaaatgctctactaggatcatcatctggttctaataca
aaagccttgggaaagaaagttatttctgattcttgtgaggggcttaaagctcataaggat
atgtgttcatcaagtgaaaccgtcactaagtcatgccttaaagtctctggcttcaagaag
cctagccattcagttacttgggctgatcagagtgatggcgtccgtggtgatctttgtgag
gttagaagcgatgatatcgagtcaggtctcaatacagaggatgtctcacgccttgcatta
gcagaagcctgtgctaaggcgttgagccaggctgctgaagctgtttcttcaggagattta
gatgcaagtgacgccgctgcaaaagctggaatcgttttgttgccaagcacacatcaactt
gatgaagaagtttccgaggaggaaatgagtgaagaagaggaggaggaggaagcaactctt
ctgaagtggccaaacaagccagggacgccggattctgatttgttcgaacgtgatcagtct
tggttcgatgaaactccagagggattcaatctaactttatcaccttttgcaatgatgtgg
gactcactgtttggctgggtgtcatcctcttcactggcgtatatatatgggaaagatgag
tctgctcatgaggagtttttgtcggttaacgggaaggagtaccccaggaggattagattg
ggagaagggctttcatcggagatcaaggagactattgctggatgtcttgcaagagctgtg
tctacagttgccactgttctcaagctgccagtacctatatccgagttagaaaagggacta
ggaagcttgttggagacattgtcgttgacaggggcggttccgtcgtttagggttgaacaa
tggctagtggttgtacttctgttcctggacgctttgtctgtgtgccggatccctcggatt
gcaccttatatattgaacagaagcaaggtgttggaaggaagtggaattggaaatgaagag
tatgagacaatgaaggagattctgttaccgcttggccgtgttcctcagtttgctacacta
tgcggggcttag
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