Brassica napus (rape): 106382732
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Entry
106382732 CDS
T04128
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bna03400
]
106382732
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
106382732
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
106382732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
AAA_30
T2SSE
DEXQc_Suv3
AAA_19
IstB_IS21
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
106382732
NCBI-ProteinID:
XP_048602799
LinkDB
All DBs
Position
A2:28545029..28557860
Genome browser
AA seq
2083 aa
AA seq
DB search
MLVQLPRLTSSLRDPFDIDQAYLRRKTILQTLNKPRSSGSRLDESDLARRIVHQWEGASP
EVRQAYKQFIGAVVELIDREVQSEEFREVAFTAYRLFGKPVEEEEDSGFSDKSVAEKKLE
LQNVVGHAVSDANVKNVASFALALYSIQPAHQSEVYADVVDDGAEFGADLVFNLPSRFLV
EESLGERGFENEESNSAHASFSEGWSDVSDMTKNQNAGKFDLSWLRDACGQMVRESNSQL
SRDELAMAICRFLDSDKPGEEIAGDLLDLVGDGAFETVQDLIMHRKEIVDAIHHGQMVLK
SDKTASNTQTRMPTYGTQVTVQTESAKQIEKLRRKEEKKNKRSAELGLESEISEANFSYL
LEASEKNSGFDDLIGSGEANSLAFALPQGTVRKHLKGYEEVFIPPTPTAQLKPGEKLIEI
KELDDVAQAAFHGYKTLNRIQSRIFQTVYNTNENILVCAPTGAGKTNIAMISVLHEIKQH
FRDGYLHKNEFKIVYVAPMKALAAEVTSAFSRRLGPLNMVVKELTGDMQLTKSELEETQM
IVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGAVIEALVARTLRQVESTQTM
IRIVGLSATLPSYLQVAQFLRVNPDIGLFYFDSSYRPVPLAQQYIGITEHNFAAKNALLN
EICYKKVADSIRQGHQAMIFVHSRKDTSKTAEKLIDLARENETLDLFTNETHPQFHIRKK
DVIKSRNKDLVKFFEAGFGIHHAGMLRSDRTLTERLFSDGLLKVLVCTATLAWGVNLPAH
TVVIKGTQLYDAKAGGWKDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLRLLT
SQLPIESQFISSLKDNLNAEVVLGTVTNVKEACAWLGYTYLSIRMKLNPLAYGIGWDEII
ADPSLTLKQRALVSEAARSLDKAKMMRFDEKSGNFYCTELGRVASHFYIQYSSVETYNEM
LKRHMNESEIIDMVAHSSEFENIVVREEEQHELETLARSCCPLEVKGGPSNKHGKISILI
QLFISRGSIDAFSLVSDASYISASLARIMRALFETCLRKGWCEMTLFMLEYCKAVDRQLW
PHQHPLRQFDRDIPFDTLRKLEERGADLDRLYEMEEKDIGALIRYNPGGRLVKQHLAYFP
SIQLEATVSPITRTVLKVDLRITPDFIWKDRFHGAALRWWILIEDTENDYIYHSDLFTLT
KRMARGEPQKLSFTVPIFEPHPPQYYVHAISDSWLHAESFYTISFHNLALPEARTSHTEL
LDLKPLPVTSLGNRLYESLYKFSHFNPIQTQIFHVLYHTDNNVLVGAPTGSGKTISAELA
MLRLFSTQPDMKVVYIAPLKAIVRERMKDWKKHLVAPLGKEMVEMTGDYTPDLVALLSAD
IIISTPEKWDGISRNWHTRSYVKKVGLVILDEIHLLGADRGPILEVIVSRMRYISSQTER
SVRFVGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPIEVHIQGYPGKYYCPRMNSMN
KPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFLSVSEEDLQMVLSQ
ITDQNLRHTLQFGIGLHHAGLNDQDRSVVEELFVNNKIQVLVSTSTLAWGVNLPAHLVII
KGTEYFDGKTKRYVDFPLTEILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLYEPFP
VESSLKERLHDHFNAEIVSGTIGNKEDAVHYLTWTYLFRRLMANPAYYGLEGTEDESVCS
YLSRLVQNTFDDLEDSGCLKVTEDSVEPMMLGTIASQYYLSYMTVSMFGSNIGPDTSLEA
FLHILAGASEYDELPVRHNEENYNKTLSEKVRYRVDNNHLDDPHTKANLLFQAHFSQLAL
PISDYNTDLKSVLDQSIRILQAMIDICANSGWLTSSLTCMRLLQMVMQGMWSDQDSSLWM
IPCMNDDLLGSLTARGIHTLHQLLELPRETLKSVTGNFPASKLSQDLQRFPRIQMNVRLQ
RKDPNGPSTLEIRLEKISKRNTSRALAPRFPKVKDEAWWLVLGDTSTSELFAVKRVSFTG
RLITRMELPPNITSLQDTKLILVSDCYLGFEQEHSIEQRPARR
NT seq
6252 nt
NT seq
+upstream
nt +downstream
nt
atgttggtccagcttcctcgcttgacaagctctctaagagaccccttcgacatcgatcaa
gcctaccttcgccgcaaaaccatactccaaactctcaacaagcctcgcagctctgggagt
cgcctcgatgaatctgaccttgctaggaggatagttcatcaatgggaaggagcttctcca
gaagtgcggcaagcgtacaagcagtttattggagctgtagtggagttgatagatcgggaa
gttcaatcagaggagtttcgtgaggttgcttttacagcgtatcgtctgtttgggaagcca
gtggaggaggaggaggacagtggttttagtgataagagcgttgctgaaaagaagttagag
ttgcaaaatgttgttggtcatgctgtctcggatgctaatgtaaagaacgtggcctccttt
gctctggcactctactcgatacagcctgctcatcagtctgaggtatatgcggatgtggtt
gatgatggtgctgaatttggtgcggaccttgttttcaatctaccaagtcgttttctggtg
gaagaatcacttggcgaaagagggtttgagaatgaagagagcaatagcgctcatgcatca
ttttctgaaggttggagtgatgtcagtgacatgacaaagaatcagaatgcaggaaaattt
gatttaagttggcttagagacgcatgcggacagatggttagagaaagcaattcacaactt
tcccgtgatgagctggcaatggctatatgtaggtttctggattcggataagcctggtgag
gagatagctggagatttgttggatcttgttggggatggcgcatttgagactgttcaagac
cttattatgcatcggaaggagattgttgatgctatccatcatggtcagatggttctcaag
tctgacaaaacagcttcaaacacccaaacccggatgcctacatatggcacacaggttact
gttcaaacagagtccgcaaagcaaattgagaaacttcggcgtaaggaggaaaagaaaaac
aaacgcagtgccgagcttggtttagagagtgaaatatcggaggccaatttttcttattta
ctagaggcaagtgaaaagaatagtgggtttgatgatctgatcgggtctggagaagccaat
tctcttgcatttgctcttccccaaggtactgtaaggaagcacttaaaaggatatgaggaa
gtctttatcccgcctacccctaccgcacaattgaaaccaggcgagaaactgattgagata
aaggagttggatgacgtcgctcaagctgcttttcatgggtacaaaactttgaaccgtatt
cagtctcgaatatttcagacagtttacaacaccaatgagaatatattggtgtgtgctcca
acaggagctggaaaaacaaatattgctatgatctctgttttacatgagattaaacaacac
ttcagggatggctacttgcacaaaaacgagtttaagattgtttatgtagctcctatgaag
gcgttagcggcagaggtcacatcagcttttagccgtcgtcttggtccattaaatatggtt
gtgaaggagcttacaggggatatgcaactcaccaagagcgaacttgaagaaactcagatg
atagtgacaacaccagaaaaatgggatgtcattactcgcaaaagcagcgacatgtcattg
tcaatgctagtaaaactcttgatcatcgatgaagtgcaccttctgaatgatgatagaggt
gcagtgatagaggcattagttgctcggaccctccgtcaggtagagtcgacgcagacaatg
ataagaattgtaggcctgtcagccactttacctagctacctacaggttgctcagttttta
cgagtgaacccagacattggccttttctattttgattcgagctatcgcccagttccctta
gctcagcagtatataggcatcaccgagcataactttgctgctaaaaatgcattgttaaat
gagatatgctacaaaaaggttgctgattcaattagacaaggtcatcaagcaatgattttt
gttcattcccgaaaagacacttcaaaaacagctgagaaattgattgatcttgctcgggaa
aatgaaacgctcgatttgttcacgaatgagactcatcctcaatttcacataagaaagaaa
gatgtcatcaagtccagaaataaggatcttgtcaaattttttgaagctggtttcggtatt
catcatgctgggatgttacgatctgatagaacacttacggagaggctgttttccgatgga
ctcttgaaggtgcttgtttgcactgcaactcttgcttggggtgtaaatttgcctgcacac
acagtcgtaattaagggaacacaattgtatgatgccaaggctggtgggtggaaagacttg
ggaatgcttgatgtcatgcagatctttggaagagctgggagaccgcagtttgacaagagt
ggtgagggaattattatcacatcccatgacaagctggcttactatcttcggctgctgacg
agtcagcttcccatagaaagtcagttcataagctccttgaaagacaatttaaacgcagaa
gtggttttgggaactgtgactaatgttaaggaagcttgtgcttggcttggatatacatat
ttgtcaattcggatgaagttaaatcctttggcctatggcattggatgggacgagataatt
gccgatccttctttaacattgaagcaacgggcccttgtgtctgaggctgcacgttcactg
gacaaagctaaaatgatgaggttcgatgaaaaaagtggaaacttctactgtactgagctt
ggacgggttgcaagtcacttctatattcaatactctagtgttgaaacgtacaacgagatg
ttgaagcggcacatgaatgaaagcgagataattgatatggttgcccattcttctgaattt
gaaaatattgtggtaagagaggaagagcagcatgaacttgagactcttgcacgttcttgc
tgtcccttagaagtaaagggaggaccttctaacaaacatggaaaaatttcgattctcatt
cagttgttcatatctcgtgggtcaattgatgcattttctctggtctctgatgcttcatat
attagtgctagtttagcacgtataatgcgtgccctgtttgagacatgtttgcgaaaaggg
tggtgtgagatgactttatttatgttggaatactgcaaggcagttgatcgtcaactgtgg
cctcatcaacatcctcttcggcaattcgatagggatataccttttgatacattgagaaaa
cttgaagagcgaggggccgacttagaccgcttgtatgagatggaggaaaaagacattgga
gcgctgattcgttacaatcctgggggaaggttggtcaagcaacatctagcatattttcct
tcaattcaactggaagctactgttagtccaatcacccgcactgtgttgaaggtggatttg
cgtataactccagattttatatggaaggatcgctttcatggtgctgctcttcgttggtgg
attctcattgaggacacagagaatgattatatctaccactcagatcttttcacactaacg
aaacggatggctagaggggaaccgcagaagctttcttttactgtgcctatatttgaacca
catccgccgcaatactatgttcatgctatttctgattcctggttgcatgcagagtctttc
tacacaatctctttccacaatcttgcactaccagaggcacgtacttctcacacagagctt
ctagacttgaaacctcttcctgtgacttctcttgggaataggttgtatgaatcgctttac
aaattttcacatttcaatccaatacagactcagatttttcatgtcttatatcacacagac
aacaatgttcttgtgggagctccaactggaagtgggaaaactatatctgctgaacttgca
atgttgcgtctcttcagtacccagcctgatatgaaggttgtttacatagcaccactaaaa
gctattgttcgagaaagaatgaaagattggaaaaagcatcttgttgctccacttggaaaa
gaaatggttgaaatgactggagattacactccagatttagttgctctcttgtctgctgat
atcatcatatctaccccagaaaaatgggacggcattagtcgtaattggcatactcgaagt
tatgtaaaaaaggtcggccttgttattttggatgagattcacttgctaggtgccgacaga
ggacccatccttgaggttattgtatctagaatgaggtacatatcatcacagacagagcgc
tctgttcggtttgttggactttctactgctctggcaaatgcaggtgatttggctgactgg
ttgggtgttggggagatcggacttttcaattttaaacctagtgtcagacctgtaccaatt
gaagttcatattcagggttatcctggaaagtattactgcccaaggatgaatagcatgaac
aagccagcatatgcagctatctgcacccattcacctacaaaacctgttcttatctttgtt
tcatcgcgtagacagacaaggcttaccgcactggatcttattcagtttgcggcgtcagac
gagcatccgcggcaatttctgagtgtatcagaggaagacttgcagatggtcctctctcag
atcactgaccagaacctccgacatacgttgcaatttggtattgggttgcatcatgcaggt
ttgaatgaccaggatagatctgtagtggaagagcttttcgtgaacaacaagattcaggtt
ttggtctcaacaagtaccttggcatggggagtgaacctaccagctcacttggttattata
aagggaacagaatacttcgacggaaaaaccaaaagatatgttgactttcctcttacagaa
atcttgcaaatgatggggcgtgctggacgtccacagtttgatcaacatggaaaagcggtt
attcttgtacatgaacctaaaaaaagcttctacaaaaagttcttgtacgaaccattcccg
gtagaaagtagcctgaaagagaggttgcacgatcacttcaatgcagaaatagtctctggg
acaattggcaacaaagaagacgctgtgcactatcttacatggacgtatttgtttcgtaga
ctgatggctaatcctgcgtactatgggctagaaggtactgaagatgagtcagtgtgttcc
tacttatcaagattggtgcaaaacacgtttgatgatcttgaagacagtggatgcctcaaa
gtaacagaagatagtgtagagcctatgatgctgggtacaatagcatcacagtattacctt
agctacatgaccgtgtctatgtttggttctaatataggccccgatacatcgctcgaagca
ttcttgcatattttggctggagcgtctgaatatgatgaacttcctgtgcggcacaatgag
gaaaattacaacaaaacattgtcagagaaagttaggtatcgagtggataataaccatcta
gatgatcctcatacgaaggcaaatctgctcttccaggcacatttttctcagctggcactt
ccaatcagtgattataacactgatctaaagtcagtcttggaccaaagcattcgaatcctc
caagccatgattgacatatgcgcaaacagtggatggctcacaagctcactgacgtgcatg
cgtctcttgcaaatggtcatgcagggcatgtggtccgaccaagattcgtcattatggatg
attccatgcatgaacgatgaccttctgggatctctaaccgcaagaggaattcacacgctg
catcagctattagaacttccaagggaaactctaaaaagtgtaaccggaaacttccctgca
tccaaattatctcaggatctccagcgattcccgcgtatacaaatgaatgtgagactccaa
aggaaggatcctaacgggccttcgacgcttgaaatcagattagaaaagatatcaaagagg
aatacctcaagggcattggcccctcgtttcccaaaggtgaaagacgaagcgtggtggttg
gtacttggtgatacttcaacttctgaactctttgctgtgaagagagtctcgttcactggt
cgtctgatcacacgcatggagttacctcccaacataacctctctccaggatactaaacta
atcttagtctcggattgttatttgggatttgagcaagaacactccattgaacaacgacct
gcccgacgctaa
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integrated database retrieval system
