Brassica napus (rape): 106382809
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Entry
106382809 CDS
T04128
Name
(RefSeq) myosin-16 isoform X1
KO
K10357
myosin V
Organism
bna
Brassica napus (rape)
Pathway
bna04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
106382809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106382809
04131 Membrane trafficking [BR:
bna04131
]
106382809
03029 Mitochondrial biogenesis [BR:
bna03029
]
106382809
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bna04812
]
106382809
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
106382809
mRNA cycle factors
P-body specific factors
106382809
Membrane trafficking [BR:
bna04131
]
Others
Actin-binding proteins
Myosins
106382809
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
106382809
Cytoskeleton proteins [BR:
bna04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
106382809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
IQ
Myosin_N
nSTAND3
AAA_16
AAA_22
CbiA
AAA_19
Motif
Other DBs
NCBI-GeneID:
106382809
NCBI-ProteinID:
XP_013678330
LinkDB
All DBs
Position
A4:complement(1578280..1585064)
Genome browser
AA seq
1175 aa
AA seq
DB search
MGENILVDSHVWVEDPETAWTHGVVLNIKGDEAEVKTNYGKEVIAKLSKLYPKDAEAPSE
GVEDMTRLSYLHEPAVLDNLATRYGLNEIYTYTGNILIAVNPFQGLPHLYDAEVMEKYKE
ASFKELSPHVFAIGGIAYREMINEDRNKCILVSGESGSGKTETTKMLMRYLAYFGGHTAG
EGRTVENQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDDVGRISGAAIRTYLLERS
RVCQVSDPERNYHCFYLLCAAPPEDVERFKLGDPKSFRYLNQSSCYELDGVNDAEEYIAT
RRAMDVVGISETEQDAIFRVVAAILHLGNIEFCKGEDADSSSLKDEQSMFHLQMTSELLM
CDPHSLEDALCKRMMVTPEEVIKRSLDPLGAAVSRDGLAKTIYSRLFDWLVNKINISIGQ
DSHSRRLIGVLDIYGFESFKTNSFEQFCINYTNEKLQQHFNQHVFKMEQGEYEKEEIDWS
YVEFVDNKDVVDLIEKKPGGIIALLDEACMLPKSTPETFSEKLYQTFKNHKRFIKPKLTR
SDFTLVHYAGEVQYQSDQFLDKNKDYVVAEHQDLLNASKCSFVSGLFPPLPKASSKSKFS
SIGARFKLQLQQLMETLNLTEPHYIRCVKPNNLLQPTVFDNANVLHQLRSGGVLEAIRVK
CAGYPTNRTFIEFLKRFIILAPEILKGEYEAGVACKWILDKKGLTGFQIGKSKVFLRAGQ
MAELDAHRTKVLGEAAKMIQGQVRTRLTRERYVILRRASVNIQANWRANLARKISRYMRR
EEAAIKIQKNLRRQIAIKDYGNTKSSAVTLQSGLRTMVARHEFHYKLKSKAATVIQAYWR
GYSAVTDYKKLKKASLVYQSKLRGRIARKQLGQSNQAEKKKETEHEREVELSNGAEEAVD
KSFVKHSDESDDEEVGHERETTHSIQADDGIEKSLVKHSEDSDDEEIGRERDTTHSIQAD
DGIEKSVVMQSEHSSDEEKGQTEHTIQANDGIENPFVLDSENLYNNFSDVSHITNPFRDT
EIESLTAEVEMLKALLQVEKQRADISERKCDEARELGERRRKRLEETERRVYQLQDSLNR
LLYSMSDQFSQLKSILRSPSMSSTVAASAPVVRDDLADSSENSEASSTDSDFTFPAPSSS
SPDNPNQLQVIVQDLSTTEAKGTEIKKEGGFEDYF
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaaacatattggtggattctcatgtttgggtggaggacccggagacagcatgg
actcatggggttgtgcttaatatcaagggagacgaagctgaggttaaaaccaattatggt
aaagaggttattgctaaactatcaaaactctatccaaaagacgctgaagctccttcagag
ggagtagaggatatgacaagattatcttatctccatgaacctgcagttctcgacaacttg
gccaccagatatggactgaatgaaatttatacttatacaggaaacattcttattgctgtc
aatccctttcaaggactccctcatctttatgatgctgaggttatggagaagtacaaggaa
gcctccttcaaagaattgagtcctcatgtttttgcaattggcggcattgcatatagggaa
atgatcaatgaggacaggaataaatgtatattggtcagtggtgaaagcgggtctggaaaa
acggaaacgactaagatgctcatgcgttaccttgcgtactttggcgggcatactgcaggt
gaaggaagaaccgttgaaaaccaagtcttagaatcaaatccagttctcgaggcatttgga
aatgcgaagactgttaagaacaacaattccagtcgttttgggaaatttgttgagattcag
tttgatgacgtgggtcggatatctggggcagccatcagaacctaccttttggagaggtct
cgtgtttgccaagtttcagatcctgagcgtaactatcactgcttttacctcctgtgtgct
gctcctccagaggatgttgagaggtttaaattgggggaccctaagtcgtttcggtatctt
aatcaatctagctgctacgaacttgatggtgtaaacgatgcagaggagtatattgctact
agaagagctatggatgtagttggaataagtgaaacagaacaggatgcaattttcagagtt
gtggctgccattctccatcttggaaatattgaattttgcaagggagaagatgctgattca
tcatctctaaaggatgaacagtcaatgtttcatctccaaatgacatcagaactgctcatg
tgtgatccccattccttagaagatgctttgtgtaagcgtatgatggtcaccccagaagaa
gttattaaaagaagtcttgatcctcttggtgctgccgtaagtagggatggcttagcaaaa
acaatatactctagactctttgattggttggtaaacaaaataaatatctccatcggacaa
gattctcactctaggcgcttgatcggagtccttgacatttatggttttgagagctttaaa
accaacagctttgaacaattctgtatcaattacactaatgaaaagctgcaacagcatttc
aaccagcacgtatttaaaatggaacaaggtgaatatgagaaagaagaaatagattggagc
tatgtggagtttgttgataacaaagatgtcgtggatctgattgaaaagaagcccggtggt
atcattgctcttctagatgaagcatgcatgctacccaaatcaactcctgaaacattttct
gagaagctgtatcaaacattcaagaatcataagcgcttcataaaaccaaaactgactcga
tcagattttactttagttcattatgcaggggaggttcagtaccagtccgatcaatttttg
gacaaaaacaaagactatgttgttgccgagcatcaggatttgttaaatgcttccaaatgt
tcttttgtgtcaggcctttttcctcctcttcctaaagcgagtagcaaatctaagttttcc
tccattggcgctcgtttcaagctacaattgcaacagctgatggagacactgaatcttacg
gagccgcactacatcagatgtgttaagccaaacaatttgttgcagccgacagtctttgac
aatgccaatgtcttgcatcagttacgctctgggggtgttcttgaggccatcagagtgaaa
tgcgctggatatccaacaaataggactttcattgaattcttaaaacggtttatcattctt
gcaccggagattctgaaaggagagtatgaagcaggtgttgcatgcaagtggattttggac
aaaaaggggcttacaggtttccaaattggaaaaagtaaagttttcctgagagctggtcag
atggctgagctagatgcacacagaacaaaagtgcttggcgaagcagcgaagatgattcaa
gggcaagttagaacccgtctcacaagagaacgatatgtaatcttgcggagggcttcagtt
aatatacaagctaattggagagcaaaccttgcacgaaagatatcaaggtacatgagaagg
gaggaagctgccatcaaaattcagaaaaacttacgtagacagattgcaattaaagattat
gggaataccaaatcttcggctgtcacattgcaaagtggactccggacaatggttgcacgc
catgagttccactataaattgaagtctaaggcagcgactgtgatccaggcttactggcgt
ggttacagtgctgtaactgactacaagaaattgaaaaaagcttctcttgtttatcaaagt
aaactcagaggaagaattgccagaaaacagttgggacagtcaaatcaggctgagaaaaag
aaagagacagaacatgaaagagaggtggaactttccaatggagcagaagaggcagttgat
aagtcctttgtaaagcattcagatgaaagtgatgatgaagaggtgggacatgaaagagag
acaacacattcaatccaagctgatgatggaattgaaaaatcattggtaaagcattcagag
gacagtgatgatgaggagataggacgtgaaagagacacaacacattccatccaagccgat
gatggcattgaaaaatccgttgtaatgcaatcagagcatagtagtgatgaagagaaagga
cagacagaacataccatccaagcaaatgatggaattgaaaacccctttgttctcgattca
gagaacctttacaacaacttctctgatgtaagccatataacgaacccttttcgtgataca
gaaattgagtccctcactgctgaagttgagatgttgaaggccttgttgcaagttgagaaa
caaagagctgacatctccgaaagaaagtgtgatgaagctcgagaacttggtgagagaaga
cgcaaacgattagaagaaacagaaagaagagtttaccaactacaagactctttaaacagg
ttgttatattctatgtcagaccaattctcgcaattgaagtccatcctgagatctccttct
atgtcttcaacggtggctgcttcagcgccagttgtacgtgatgatcttgctgacagctct
gagaactctgaagcttcatcaactgattctgatttcacttttccagctccatcttcttct
tctccagataatccaaatcagctgcaggttattgttcaagatctatcaaccacagaggcc
aaaggaacggagattaagaaggaagggggatttgaagattacttttga
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