Brassica napus (rape): 106382976
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Entry
106382976 CDS
T04128
Name
(RefSeq) cytosolic endo-beta-N-acetylglucosaminidase 1-like
KO
K01227
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:
3.2.1.96
]
Organism
bna
Brassica napus (rape)
Pathway
bna00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
106382976
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
106382976
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_85
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
106382976
NCBI-ProteinID:
XP_013678531
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Position
C3:1127648..1130776
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AA seq
680 aa
AA seq
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MSISKDETMLAPPPSFDPTKPSRPISFPIKTLQDLASRSYFDSFHFPFNRSSVPLRQNIG
SLPDRSRLLVCHDMKGGYVDDKWVQGCGNNKGFAIWNWYLMDVFVYFAHSLVTLPPPCWT
NTAHRHGVKVLGTFITEWDEGKATCKELLATKESAQMYAERLAELAAGLGFDGWLINIEN
VIDQVQIPNLKTFVSHLTKAMHSSVPGSLVIWYDSVTVKGSLAWQDQLNEMNKPFFDICD
GIFMNYTWKENYPKESAKIAGDRKHDVYMGIDVFGRGTFGGGQWKANVALDLLKSSDVSA
ALFAPGWVYETDQPPDYHTAQNKWWSLVEKSWGIVQTYPQSLPLYSDFNQGLGSHVSLQG
QKLSDAPWYNISCQSLQPLLEFNEGNKSETMQVTVDGREASYNGGGNISFKGTLKRNAHH
TTRLFKPNLQLSGSHISVSYSVKSDERSMLGLLLRFSTPSQETKSLVMAPNEYMHRFGDM
FLPCLRRTTSDWTVHEANLLMDGHTLTEISALCYGPDDLAEETNTQGYSALLGHISIKSQ
QKTKLFPPASAWVVEAHNIEIVPGDSGSRTVSCKLQWRLKHPEEDSVFTRYNVYAEKLNS
SDYKSRKVMEEPRSEENFLGTAHVDAYYVSDMVVGPDVKKVRFVIQTWDEDGSWQELDTS
PSVLVEAERLSSKLCCCGLI
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtccatatccaaagacgaaactatgctagctccacctccatctttcgatcccactaag
ccatccagaccaatctcatttccaatcaaaacactccaagacttggcttctcggtcttac
ttcgactcctttcacttcccctttaaccgctcctccgtccctctccgacagaacatcggt
tccttgcctgaccgatccaggcttcttgtttgtcacgacatgaaaggagggtacgttgac
gacaagtgggtacaagggtgtggaaacaacaaaggtttcgcgatctggaactggtacttg
atggacgtttttgtctacttcgctcactctctcgtcactcttcctcctccttgctggacc
aacactgctcacagacacggtgtcaaggtactggggactttcatcacagaatgggacgaa
ggtaaagctacgtgcaaggagttgttggcgactaaggagtctgcgcagatgtatgcagag
cgcttagcagagcttgctgctggtctaggctttgatgggtggctgattaatatagagaat
gtaatagatcaagtccagattccaaatttgaagacttttgtaagccatcttacaaaagcc
atgcattcatctgtacccgggagtttagttatatggtatgatagtgtcactgttaagggc
agccttgcttggcaagatcagttgaatgaaatgaacaaacctttctttgatatatgtgat
ggaatattcatgaactatacatggaaggaaaactaccccaaagaatcagccaaaattgct
ggtgacagaaaacatgatgtctacatggggatagatgtgtttggtaggggcactttcggt
ggtggccagtggaaggcaaatgttgcacttgatttgctgaagagcagcgatgtatcagct
gcactatttgctcctggatgggtgtatgagaccgatcaaccaccagattatcataccgca
caaaacaaatggtggtcacttgttgagaagtcatggggaatagttcaaacatatccacaa
tccttacccttatactcagatttcaatcagggacttggttctcatgtttctctccaaggt
cagaaactatcagatgctccctggtacaacatttcttgccaaagtctgcagccactctta
gaattcaatgaaggaaacaagtcagagaccatgcaggtcactgttgatggtagagaagca
tcatataacggaggagggaacattagtttcaaaggaacactaaagagaaatgcacatcac
acaacaagactattcaaacctaaccttcagctttctggttctcacatctctgtctcctac
tctgtgaaatcagatgaaagatctatgctaggccttctcctccgtttttcaactccttca
caggagacaaagtccttagtcatggctccaaatgaatacatgcacagatttggtgacatg
ttcctgccatgcctaagaaggaccacatcggactggacagtgcacgaagcaaaccttctt
atggatggacacacactgactgagatctctgccttgtgctacggtccagatgatcttgca
gaagaaacaaacacacaaggatactctgcattgcttggccatatctctatcaagtcccag
cagaaaaccaaactcttccccccagcgtcagcatgggttgtcgaggctcataacatagag
attgtaccgggtgattctggctccaggactgtaagttgtaagctgcaatggaggttgaag
catcctgaggaggattctgtgtttacaaggtacaatgtgtatgcggagaagctgaattca
agtgattacaagtcaaggaaggttatggaagaaccgagaagcgaggaaaattttcttggg
acggctcatgttgatgcttattatgtttctgatatggtggttggaccagatgtgaagaaa
gtcaggtttgtgattcagacctgggatgaagatggttcatggcaggagctggatacttcc
ccaagcgttctcgttgaggcagaacgtctcagttcaaagctttgttgctgtgggttgatt
tga
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