Brassica napus (rape): 106383018
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Entry
106383018 CDS
T04128
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106383018
Spliceosome [BR:
bna03041
]
Common components
Common spliceosomal components
General mRNP proteins
106383018
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
106383018
NCBI-ProteinID:
XP_013678586
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Position
C2:complement(1557242..1560777)
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AA seq
530 aa
AA seq
DB search
MEFDEYEYLEKTVEEGDASADRKKEGSGNEKSERTYRKREGERRDEEERGSSRSKKSRGE
EEENGGGRRDREKERHRSSRDKDRERSSKERDRSDREKSRDRERGGSRDRERDRSDREKS
RDREREKDRERRERERRSSSRSRREEREREVVERGSRRHRDKKDEPEADPERDQRTVFAY
QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIAMSGQLF
LGQPVMVKPSEAEKNLAQSTTTAGGGTGPVDRKLYVGNLHFNMTELQLRQIFEPFGPVEL
VQLPCDLETGQCKGFGFIQFAQVEHSKAAQIALNGKLEIAGRTIKVSSVADHIGTQDGNP
KSADFDDDDGGGLALNAQSRVLLMQKLDRTGLAASIGVPALNGTALNQPGMNPGFPTSVL
PTTALPSVVTEPIGQPSECLLLKNMFDPATETELNFDEDIKEDVGDECSKYGEVKDIYVD
KNSAGFVYLRFESVQAAMAAQRAMHTRWFAQKMISATFLPPHEYEARAKA
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgacgagtacgagtacctggagaagacggtggaggaaggagatgcgtcggcg
gataggaagaaggaagggagcgggaacgagaagagcgagaggacttacaggaagagagaa
ggagagaggcgcgacgaagaagagcgagggagcagtcggagtaagaagtctcgaggagag
gaagaagagaacggtggaggtaggagggatcgggagaaggagaggcacaggagcagccga
gacaaggatagagagaggagtagcaaagagagggacaggagcgatagggagaagagccga
gacagagagaggggagggtcgagagacagagagagagataggagcgatagggagaagagc
agagacagagagagggagaaggatagagagaggagggagagggagaggagaagcagcagt
aggtcaaggagggaggagagggaacgggaagtagttgaaagaggaagcaggagacacagg
gacaagaaagatgagcctgaagctgatccagagagggatcaaagaactgtctttgcatat
cagatgcctcttaaagctaccgagagagatgtttatgagttcttctccaaagctggcaag
gtcagggacgtgcggttgatcatggacagaaactcaagacgatctaaaggagtcgggtat
atcgagttttatgatgtgatgtcggttccaatggctatagctatgtccggacagctattt
cttggacaacctgtgatggttaagccctctgaagctgaaaagaatttggctcaatccact
actactgcaggcggtggtactggccctgttgacaggaagctgtatgtggggaacttgcat
ttcaacatgacagagttgcagcttagacagatttttgagccgtttggtcctgttgagctt
gttcagcttccttgtgacctcgagactgggcagtgcaagggttttggattcattcagttt
gcgcaagttgaacattcaaaggcagcacaaatagccttaaacggaaaattggagattgct
ggaaggacaatcaaggtttcctctgtcgctgatcatattggcacacaagacggtaatcca
aaatcagctgattttgatgatgatgatggaggaggcctggctttaaatgcacaatcgagg
gtcctacttatgcagaagctggatcgtacaggtctcgcagcaagtattggagtaccagcg
ctaaatggaacagctcttaaccaaccaggcatgaatcctggtttcccaacatcagtgctt
ccgacaacagcactcccttctgttgtcacagagcctattggtcagccaagtgaatgcctt
ctactgaagaatatgtttgatcctgcaactgagacggaactgaattttgatgaagacatt
aaagaagacgttggcgatgaatgctccaagtatggcgaagtcaaggatatttatgtagac
aagaacagcgcaggttttgtgtatctgcggtttgaatcagtgcaggcggcaatggcagct
caaagagctatgcacacgagatggtttgcacaaaagatgatatctgcaactttcttgcct
ccacatgaatatgaagccagagccaaggcgtga
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