Brassica napus (rape): 106384513
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Entry
106384513 CDS
T04128
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106384513
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
106384513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Tudor_5
Motif
Other DBs
NCBI-GeneID:
106384513
NCBI-ProteinID:
XP_048624362
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All DBs
Position
C9:64508815..64511888
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AA seq
578 aa
AA seq
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MASYRPPPPPSPLPPPPQNPPPPPPLPPSLPPPVPPPPPSHQPYAYPPHTYYQQPSHYPP
PQFNQLQAPPPPPPPSAPPPTVPDPPRNQAANDRHKAASKPPRERPPSKQHHRPHHHPHS
KNPEEERRQRKKREAEKEKERQQMKSSSHKSQVPKGHTEERKPTPLLTADRVENRLKKPT
TFICKLKFRNELPDPTAQLKLMTIKRDKDQYTKYTITSLEKLWKPKIFAEPDLGIPLDLL
DLSVYKPPKVRQPLAPEDEELLRDDDAVTPIKKEGIKRKERPTDKGVSWLVKTQYISSIN
NESTRQSLTEKRAKELREMKGGVDILQNLNNRERQIKDIEASFEACKSRPVHATNKKLQP
VEVLPLLPYFDRYEEQFVVANFDSAPTADSEFFGKLDSSIRDEHESRAILKSYVIAGSDN
SNPEKILAYMVPSLDELSKDMHDENEDISYTWVREYLWDIPPKEPNERDTYLVSFEDGTA
SYLPLPTRLNMRKRRAREGRAFDEIEHLPVPSRVTVRNRSSVSIIEHKDSMVNSNSRNGA
SSSKMRRLEDEEGLGRSWKHGSEQDANQYSDNNDDYSE
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtaccggccgccgcctcctccgtctcctctcccaccgccgcctcaaaatccc
ccacccccaccacctcttcctccgtcgttacctcctcccgtccctcccccaccgccgtcg
catcaaccttacgcttatcctcctcatacttactatcaacagccgtctcactatcctcct
cctcaattcaaccagcttcaagctcctccgcctccgcctcccccgtcagcacctcctcct
accgtaccggatcctcctcggaaccaagcggccaatgaccgccacaaagcggcctccaag
ccgccgcgggagcgtcctccatcgaagcagcaccacaggcctcatcatcatccgcatagt
aagaatccggaagaggagaggaggcaaaggaagaagagggaggcagagaaagagaaagag
aggcagcagatgaaatcgtcgtctcacaagtctcaggttcccaaggggcacacggaggag
aggaagcctacgcctcttctcacagccgatagggtcgagaatcggttaaagaaaccaacc
accttcatctgcaagctcaagttccggaatgagcttcctgatcctactgctcagcttaag
cttatgaccatcaagcgtgataaagatcaatacacaaagtataccatcacgtctctggag
aagttatggaaaccaaagatcttcgccgagcctgatcttggaatacccttggatcttctt
gacctaagtgtctacaaaccaccgaaagtgaggcagcctcttgcccctgaagatgaagaa
ctgttgcgtgatgatgatgctgttacccctatcaagaaagaaggcatcaagagaaaagaa
agacctaccgataaaggtgtttcctggctcgtcaaaacgcagtacatttcttctattaat
aatgaatccacaagacagtctctaactgagaagagagcaaaagaactgcgagagatgaaa
ggaggcgtcgacatcttgcaaaatcttaacaatagagagagacagatcaaggatattgaa
gcatccttcgaggcctgcaaatctcgaccagttcatgccaccaataaaaaattgcagcct
gttgaagttttaccactattgccatatttcgataggtacgaggagcagtttgtggtagcg
aattttgatagtgctcctacagctgattctgagttttttggcaagttggactcttcaatt
cgtgatgaacatgaatcacgggccattttaaaaagctatgtaattgctggatcggacaat
agcaatcccgaaaaaattcttgcgtacatggttccttccttggacgagttgtctaaggat
atgcatgatgaaaacgaggatatctcttatacttgggttcgcgaatacctctgggatata
ccaccaaaggaaccaaacgagcgtgacacatacctggtgtcgtttgaggatgggaccgct
agctatttgcccctaccaactaggctgaacatgaggaagagaagggccagggaaggaaga
gcgtttgatgagattgaacacttaccagtaccttcaagggtgactgtaaggaacagatcg
tctgtatcaataatcgaacataaagattcaatggttaattcaaattctaggaatggtgcg
tcgagctccaagatgagaaggttagaggacgaagaaggccttggcagatcttggaaacac
gggtcggaacaagatgctaatcaatatagtgataataatgatgattattctgagtga
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