KEGG   Brassica napus (rape): 106384969
Entry
106384969         CDS       T04128                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.3
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:bna04812]
    106384969
Cytoskeleton proteins [BR:bna04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     106384969
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_EIPR1 WDR90_beta-prop_4th eIF2A Beta-prop_HPS5 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_RIG_1st Beta-prop_VPS8 PROPPIN PAN2_N
Other DBs
NCBI-GeneID: 106384969
NCBI-ProteinID: XP_048607824
LinkDB
Position
C3:1933000..1938394
AA seq 831 aa
MTTKRAYKLQEFVAHSAAVNCLKIGRKSSRKLVTGGEDHKVNLWAIGKPNAILSLQGHSS
GVDSVTFDASEGLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVNFHPFGEFFASGS
RDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLHE
FKSHEGQIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGK
SVLCGLHESLKIFSWEPIRCHDGVDVGWSNLSDMNVHEGKLLGCSYNQNCVGVWVVDLSR
TEPMSGGATQSNFHQERISSSGRDQPVLNDNSSKVILRNGSQKVNPSLKETKSHGRSSVP
QNPDPSPKEPKSTGRSSVSQSSDPLVKEPKPLGRLSVTHSSDAAKESLTSSSTGSTSGSP
HRLTSTSSPKVSSGVVSTAAASKRNNLKANLPIVNKGDFSSVIVPRTDPIIEQAVESRAE
LDIIGRTMPYSLQSKAADSRRLSSIRNEPDLPTDSPLERSHSQPTEPSNLQDGNTFTSEE
SGEWDTAERKNKDNRYRGFGRFNSRSLLRSPPRNHDENSDLNSFCGNRDQSPIESRRGGR
LHSLAQYRERRGRIFNSEGDHVSSSSGGNMTTPNIRPSNMFNQRGNHVPVDEGITSDSEE
DKAAEVMGQHDQFVSSMQSRLAKLQVVRRYWERNDVKNSISSIEKMADNAVVADVLVIIT
ERTEVLTLDTCTSLLPLLSALLASNMDRHLSVCLDLLLKLLRMYGSQIYSSLSAPSSVGV
DIEAEQRMERYSRCFVELEKIKACLPSLERRGGLVAKTIHELNLIFQEVSS
NT seq 2496 nt   +upstreamnt  +downstreamnt
atgaccaccaagcgcgcttacaagctccaggagtttgtggcacattctgctgctgtgaac
tgtcttaagattgggaggaagtcctctaggaagctagtaacgggtggggaagatcacaag
gttaatctttgggctattggtaagcccaatgccattctgagcttgcaagggcactcgagc
ggggttgattcagtaacgtttgacgcttcggagggattagtagcagcaggagctgctagt
ggcactatcaaactttgggatctcgaggaggcaaagattgtcaggactctcactggtcac
aggtcgaattgcatatccgtgaactttcacccgtttggtgagttctttgcttctggttct
cgagacacgaatcttaagatatgggatataaggaagaagggctgcatccatacctacaaa
ggccacactcgaggtgtcaatgtactcagattcacccctgatggtcgttgggttgtatct
ggaggagaagacaatattgtaaaggtgtgggatttgacagctggaaaactgttgcatgag
ttcaagagccatgaagggcaaattcagagtttagattttcatccccatgagtttctgctt
gcaacaggttcagctgataagactgtaaaattctgggaccttgaaacattcgagcttatt
ggttctggtggaaccgagactactggggttcgttgcttgacctttaatccagatggaaag
agtgtgctttgtggattgcatgaaagtctcaagattttctcatgggagccaataaggtgt
catgatggagtcgatgttggatggtcaaacttatcggatatgaacgttcacgagggaaag
cttcttggttgctcatataatcaaaactgtgtaggcgtgtgggttgtagacctctcgcgt
actgagcctatgagtggaggcgccactcagtcaaattttcatcaggagagaatatcgagc
tcaggcagagatcaaccagttctgaatgataacagctcaaaggtcattctcagaaacggt
tcccagaaagtgaatccttcattgaaagaaacaaagtctcatggaagatcatcagttcct
cagaacccggatccttcgccaaaggagccaaagtctactggaaggtcatcagtatctcag
agctcagatcctttggtaaaggaaccaaagcctcttggaagactgtcagttactcatagc
tcagacgcagctaaagagtcattaacctcttcatccacaggaagtacatcaggctctcct
cataggctcacatcaaccagttctccaaaagtttcttctggtgttgtctctactgctgca
gcctcaaagaggaataacttaaaggcaaatcttccaatagtcaataaaggggatttttcc
tcagtaattgttcccagaacggacccaatcattgagcaagcagttgaatccagagcagag
cttgacattattggaagaactatgccatattcgttgcagtccaaggcggctgattctcga
aggctgtctagcatcagaaatgagccggatctaccaactgattcgcctcttgaaaggtct
cactctcagcctacagaaccaagcaatttacaagacggaaatacatttactagtgaagaa
tctggcgaatgggatacagctgagaggaaaaataaagacaacagatacagaggatttgga
aggtttaattcaagatctttgctgagatcacctccaagaaatcacgacgaaaactctgac
ttgaatagcttttgtggaaatagagatcaaagtcctattgaaagtcgaagaggaggaaga
ctgcattccctcgctcaatatagggaaagaagaggaagaattttcaactcggagggtgat
catgtttcgagttcttctggtggaaatatgactacaccaaacattcgcccttccaatatg
ttcaatcagagaggaaaccatgtgccagttgatgaaggaatcacttctgatagtgaagaa
gataaagctgcagaggtgatggggcagcacgatcaatttgtcagctctatgcagtctcgt
ttggctaagttacaggttgtccgaagatattgggaaagaaacgatgtcaaaaactcgata
agttcaatagagaagatggctgataatgctgtcgttgcagatgtattggttataatcact
gagagaactgaggtattgacactggatacctgtacctctcttcttccccttttgtcagct
cttctagcgagtaacatggatagacatttgagtgtctgcctagacttgctgctaaaactg
ttaagaatgtatgggtcacaaatttactcgtcgctgtcagctccatcatctgtcggtgta
gatattgaggctgagcaaaggatggagcggtacagtcgttgctttgttgaactcgagaaa
atcaaggcttgtcttccctctttggaaagaagaggaggattagtggcaaagactatccat
gaactcaatttaatattccaagaagtttcatcatga

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