Brassica napus (rape): 106385055
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Entry
106385055 CDS
T04128
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106385055
09122 Translation
03013 Nucleocytoplasmic transport
106385055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106385055
03041 Spliceosome [BR:
bna03041
]
106385055
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106385055
Spliceosome [BR:
bna03041
]
Complex C
Other components
EJC/TREX
106385055
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106385055
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_NOL10_N
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
DSE1_N
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
eIF2A
Beta-prop_HPS5
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
NBCH_WD40
WD40_RFWD3
Tricorn_2nd
Beta-prop_DCAF12
WDR90_beta-prop_4th
TRM82_WD
Beta-prop_IFT122_2nd
Beta-prop_ELP1_1st
Beta-prop_NUP159_NUP214
Beta-prop_WDR41
CFAP251_N
PAC11
PSII_BNR
Beta-prop_Nup120_160
Beta-prop_WDR11_1st
PROPPIN
Beta-prop_VPS8
DUF7099
WD_LRWD1
PD40
Motif
Other DBs
NCBI-GeneID:
106385055
NCBI-ProteinID:
XP_013675655
UniProt:
A0ABQ7XUS2
A0A078J1Z0
LinkDB
All DBs
AA seq
321 aa
AA seq
DB search
MEETIPFKNLHSREYQGHKKKVHSVAWNSNGTKLASGSVDQTARVWTIEPHGHSKVKDLE
LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQAELSGENINITYRPDGT
HIAVGNRDDELTILDVRKFNKSLYKRKFSYEVNEIAWNMSGDLFFLTTGLGTVEVLSYPL
EKMQNDLKPVDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDMSDMLCLRTFTKLDS
PVRTISFNHSGEYIASASEDLFIDIANVQTGRTLHQIPCRAAMNSVEWNPKYNLLAYAGD
DKSAKYYGDEGVFRIFGFDSS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggaggagactattcctttcaagaatcttcatagcagagagtatcaaggtcacaagaag
aaggtacattcggtagcttggaactctaatgggacaaagcttgcctctggttctgttgac
caaaccgctcgtgtttggaccatcgaacctcacggtcatagtaaggttaaggaccttgag
ctaaagggacatactgatagtgtggatcagctatgctgggacccaaaacattcagatctc
gttgctactgcctctggcgataagagcgttcgtctctgggatgctcgcagtggaaaatgt
acacagcaggcagagcttagtggggagaatataaacatcacctacagacctgacgggaca
catatagctgttggtaatagggacgatgagcttaccattctggatgtccgtaagtttaat
aaatccctatacaagcgcaaattctcatatgaggtaaatgagattgcttggaacatgtca
ggagatctgttcttcttgactactggtcttggcactgttgaagttctctcatatccactt
gagaaaatgcaaaatgatcttaaaccagttgacactctcactgcccacacagccgggtgc
tactgcattgcaattgatcctaaaggaagatactttgctgttgggagtgctgattcttta
gtcagcctttgggatatgtcagacatgctttgtttgagaacatttacaaaacttgactcg
cccgtcagaacaataagcttcaaccattcaggagaatacattgcttcagctagtgaggat
ctatttatagatattgcaaacgtccaaactgggcggacgctgcatcaaattccatgtaga
gctgccatgaacagcgtggagtggaatccaaaatacaacttacttgcatatgcaggtgat
gacaagagtgccaagtattatggtgatgaaggtgttttccgaatatttggttttgatagc
tcttag
DBGET
integrated database retrieval system