Brassica napus (rape): 106385166
Help
Entry
106385166 CDS
T04128
Name
(RefSeq) putative geranylgeranyl pyrophosphate synthase 8, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
bna
Brassica napus (rape)
Pathway
bna00900
Terpenoid backbone biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
106385166
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bna01006
]
106385166
Enzymes [BR:
bna01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
106385166
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
106385166
2.5.1.29 geranylgeranyl diphosphate synthase
106385166
Prenyltransferases [BR:
bna01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
106385166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
106385166
NCBI-ProteinID:
XP_022555247
LinkDB
All DBs
Position
C3:complement(27372663..27373862)
Genome browser
AA seq
265 aa
AA seq
DB search
MPTWFSPSRRDPTRSLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNVDL
RRGKPTNHKVFGEAMAVLAGDAPLSLAFEHMTVMSSGLITPERMIHAVIQLAMAIGTKGL
VAGQVVDLRSQGLNPDDVGLDRLEFIHLDKTAALLEAATVIGAIMGGGTQEEIDKLRKYA
RCIGLLFQVVDDILDVTKSSEELGKNAGQDVITGKVTYPRLIGLEKSRELAEKLSREAEE
QLIGFDSDKAAPLVALASYIACRNN
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgcccacttggttctctccatctaggagggacccaacaagatctctgctctgcattgct
gcatgtgagcttgtgggtggcgacgaggccactgccatgtcagccgcttgcgcggtcgag
atgatccacacgagctctcttatccatgacgaccttccatgcatggacaatgtggacctc
cgcagaggcaagcctacaaaccacaaggtatttggagaagctatggcggttttggcaggt
gatgcacccctttctttggcgtttgagcatatgaccgtcatgtcgagtgggttgatcacc
cctgagaggatgatccatgctgtgattcagcttgcaatggccattgggacaaaagggcta
gtggctgggcaagtggttgacctacgaagccaagggttgaatccggacgacgtcggattg
gaccgcctagagttcattcacctcgacaaaacagcggctttgttggaggcagcgacggtt
ataggagccataatgggaggtggcacacaggaagagatcgacaagcttagaaagtatgcc
agatgcattggccttttgtttcaagtggttgatgatattcttgacgtgacgaaatcttcc
gaggaattgggtaagaacgccggacaagacgttatcaccggaaaagtgacgtatccgagg
ctgattggtttggagaaatcgagggaacttgcggagaaattgagcagagaagcagaggaa
cagcttatagggtttgattctgataaggcggctcctctagtggctctggctagctacatt
gcatgtagaaacaattga
DBGET
integrated database retrieval system
