Brassica napus (rape): 106385659
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Entry
106385659 CDS
T04128
Name
(RefSeq) tRNA pseudouridine synthase A 1-like
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106385659
Enzymes [BR:
bna01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
106385659
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
106385659
Prokaryotic type
106385659
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
CBAH
Motif
Other DBs
NCBI-GeneID:
106385659
NCBI-ProteinID:
XP_013681019
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All DBs
Position
C3:24447281..24449135
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AA seq
322 aa
AA seq
DB search
MSGATPALPPSLFTNGSLSSPQNISKTDLNSFVKVSDPGGFKWRLVIAYDGTKFAGWQYQ
ESPPTVQSMLEKALTQITKVQRKELHLVGAGRTDAGVHAWGQVAHFVTPFNYNTLDSIHA
ALNGLLPLDIRVREIGAAVPEFHARFSCRSKVYRYQIYSDTFMDPFQRHFAYHTAYKLNA
CKMREAAQHFVGKHDFSAFANATREDGVPDPLKTISRFDVIEMGSLLHLEVEGSGFMYRQ
VRNMVALLIQVGKEALDSDIVPMILETKDRRELAKYTLPAPPHGLCLVSVKYKEDHLQLP
PDCPLTSFGRHHTITKCKLPFY
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcgctacaccagcgcttcctccgtcactctttaccaatgggtccctatcttct
cctcagaatatctccaagactgacttgaacagttttgtaaaggtcagtgatcctggtggc
tttaaatggcgacttgtgatagcatacgatggcaccaagttcgcaggttggcaatatcag
gagtcaccaccaacggtccaatcaatgttagagaaagccttaactcagataacaaaggtc
caaagaaaagagcttcatctagttggagctggtaggactgatgcaggagttcacgcttgg
ggtcaggtagctcattttgtgactccttttaattacaataccttggacagcatccacgcc
gcgttaaacggtcttcttcctctagacatccgtgtcagagagatcggtgcggcggttcct
gagttccacgctcggttctcttgccgtagcaaggtttaccgataccagatatacagcgac
acgttcatggacccgttccagcgtcatttcgcttaccacactgcttataaactgaatgct
tgtaaaatgcgggaagctgcacagcattttgttggcaagcatgatttctctgcgtttgct
aacgctacaagggaagatggagtgcctgatcctttgaaaactatctctcgttttgatgtc
attgaaatgggatctcttctacatcttgaagttgaaggctcagggtttatgtacagacaa
gttagaaacatggtagctttgctgattcaggttggaaaggaagcattggattcagacatt
gtcccaatgattctggaaaccaaagacaggagagagcttgccaagtatacattgcctgcg
ccacctcatggtctttgtcttgtctctgttaagtataaggaagatcatttacagcttcca
ccagattgtcctttaactagttttggtagacatcacactataacaaagtgtaaacttccc
ttctattga
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