Brassica napus (rape): 106385944
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Entry
106385944 CDS
T04128
Name
(RefSeq) serine/threonine-protein kinase VPS15-like
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
bna
Brassica napus (rape)
Pathway
bna04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
106385944
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bna01001
]
106385944
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106385944
Enzymes [BR:
bna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
106385944
Protein kinases [BR:
bna01001
]
Serine/threonine kinases: Other
VPS15 family
106385944
Membrane trafficking [BR:
bna04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
106385944
Autophagy
Autophagosome formation proteins
PI3K complex
106385944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
VPS15-like_hel
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
HEAT
PK_Tyr_Ser-Thr
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
NBCH_WD40
EIF3I
WDR90_beta-prop_4th
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Adaptin_N
Beta-prop_CAF1B_HIR1
Vac14_Fab1_bd
APH
HEAT_EZ
Tti2
TCAD9
Motif
Other DBs
NCBI-GeneID:
106385944
NCBI-ProteinID:
XP_048601345
LinkDB
All DBs
Position
C1:complement(5623578..5630120)
Genome browser
AA seq
1477 aa
AA seq
DB search
MGNKIARTTQVSATEYYLHDLPSSYNLVLKEVLGRGRFFKSILCKHDEGLVLVKVYFKRG
DSIDLREYERRLVKIKDVFLSLEHPHVWPFQFWQETDKAAYLVRQYFFSNLHDRLSTRPF
LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLADFASFKPTYIPYDD
PSDFSFFYDTRERRLCYLAPERFYEHGGETKVAQNAPLKPSMDIFSVGCVIAELFLEGQP
LFELAQLLAYRRGQHDPSQHLEKIPDPGIRKMILHMIQLEPEARLSAENYLQNYVGVIFP
NYFSPFLHTLYCCWNPLPSDMRVATCQGIFQEILKKMMENKPGDEMGVDSPIPSHPVNAS
KVQETFANQKLNTSKDLIRDTVNSKDETLYSISDALKKNRHPFLKKITMDDLGTLLSLYD
SRSDTYGTPFLPVEVNMRCEGMVLIASMLCSCIRNIKLPHLRREAILLLRSCSLYIDDED
RLQRVLPYVVSLLSDTTAIVRCAAMETLCDILPLVRDFPPSDAKIFPEYIFPMLSMLPDD
PEESVRICYASNIAKLALTAYGFLIHSFQLSNVGVLNESTSPQISSTSASELQKANGEAQ
LSQLRKTIAEVVQELVMGPKQTPNVRRALLHDIGELCFFFGQRQSNYFLLPILPAFLNDR
DEQLRSVFFEKIVYVCFFVGQRSVEEYLLPYIDQALSDQTEAVIVNALDCLSILCKSSFL
RKRALLQMIECVYPLLYYPSQWVRKAVVTFIAACSEFLGAVDSFAFIAPVIRPFLSRLPA
SIASEEGLFSCLKPPVTREAVYRILETARKPEIADKQRKIWYSTSPQSGTLNLLEHGAEQ
KKSVEGKKPIMNALQQQEVQGKYAEKDAKLRIPRNPRLNASNTVELRDHLNQEKLQFSGL
MAPYMSGMNNVTEPEGIPLYSFNMDKRAATNPPVASESSLQMNSLGMSSLSVPWMDSMSK
SFNLASSVPVPKLVSGSFHVGTNPKQFYRVVHEPESRENEQMSSVISKFQDLGVSTSLKS
ASVTSEDASSISDLVGEPSSSRTSVPDSGWKPRGVLVAHLQEHRSAVNDIATSSDHSFFV
SASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRGMCTTMLRNSTQVVVGASDGVLHMFS
IDHISRGLGNVVEKYSGIVDIKKKDVKEGALLSLLNYTSDSLSGPMVMYSTQNCGIHLWD
TRSDIDAWTLKANPEEGYVSSLVTSPCGNWFVSGSSRGVLTLWDLRFRVPVNSWQYPIIC
PIEKMCLCFLPPSASLSSTMRPFIYVAAGFNEVSLWNADGGICQQVWRVANYENETNVSE
FQWKLPSSKANPKANIRKNMSSKYRIEELNEPPPRLPGIRSLLPLPGGDLLTGGTDLKIR
RWDYSSPERSYCICGPSLKGVVNDDFYELKTNSGVQFVQETMRRPLATKLTAKAVLAAAA
TDTAGCHRDSVQSLASVKLNQRLLISSSRDGAIKVWK
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atggggaacaaaatcgctcgaacgacacaagtctcggcgacggagtactacctccacgac
ttgccttcctcttacaatctcgtcctcaaggaggttctaggtcgcgggagattcttcaag
tcgatcctctgtaagcacgacgaagggttggtcctcgtcaaggtctatttcaagcgcggc
gactcgatcgatctcagggagtacgagaggcgtcttgtgaagataaaggatgtgtttttg
tctctggagcatcctcacgtctggccttttcagttttggcaagagactgataaagcggct
tatttggtgaggcaatactttttcagtaacctgcatgatcggttgagtactcggcctttc
ctcagtcttgtggagaagaaatggttggcgtttcagttgcttcttgctgtgaagcagtgc
catgagaagggtatatgtcatggtgatatcaagtgcgagaatgttttggtcacttcctgg
aactggctttaccttgctgactttgcgtctttcaaacccacatacattccttatgatgat
ccttcagacttttccttcttttatgatacaagggaacgaaggctttgttatctggctcca
gagagattctatgagcatggaggtgagaccaaagttgcacaaaatgctccattaaagcca
tccatggatatattttctgtggggtgcgtgatagcagagctttttcttgagggtcagcca
ctatttgaacttgctcagcttctcgcttatcgcagaggacaacatgatcctagccaacac
cttgaaaagattcctgatcctggaattcgcaagatgattcttcatatgattcagttagaa
cccgaagcacgcctatcagctgaaaactacctgcaaaattatgtgggagttattttccca
aactacttctcaccatttctgcacactttgtactgttgttggaatccacttccttcagat
atgagggtagcaacttgccagggcatatttcaagaaatacttaagaagatgatggaaaat
aagccaggtgatgagatgggtgttgattctcctataccttcacatccagtgaacgcaagc
aaggtacaagaaacttttgcaaatcagaaactgaacacgtcgaaggacttgataagggat
actgtaaactctaaggacgagaccctttactctatttctgatgcactcaagaaaaatcgc
catcctttcttgaaaaagataacaatggacgatttgggtacactgttgtctctctatgat
agccgttccgacacttacggaactccttttctacctgtagaggttaacatgagatgcgag
gggatggttctgattgcgtctatgctctgctcctgtatccgcaatatcaagttgcctcat
ttgaggagggaagccatacttctgttgaggtcttgctctttgtatattgatgatgaagat
cgcttacagcgtgtacttccgtatgttgtttccctgctttctgatacaacagcaatcgtg
cggtgtgctgccatggaaactctatgtgacattctgccgcttgtccgagattttcctccc
agtgatgcgaagatttttcctgagtatatatttccgatgctctccatgcttcctgatgat
ccagaagagagtgtgaggatatgttatgccagcaatattgcgaaacttgctcttactgct
tatggattcttgatacattctttccaactgagcaacgtaggggttcttaatgaatcaact
tcgccgcagatctccagtacatctgctagtgagctccaaaaggcaaatggcgaagcacag
ctttcacagcttaggaaaactattgccgaagttgttcaagagcttgttatgggtccaaaa
cagacaccgaatgttagaagagcactccttcatgacataggggagctttgctttttcttt
ggtcagaggcagagtaactactttctactgcccatcctccctgcctttcttaacgacaga
gatgaacagctaagatctgtattcttcgagaaaattgtttacgtatgcttctttgtcggt
cagagaagtgtggaggagtacctcttgccttatattgatcaagctttaagtgatcagacg
gaggctgtcattgtcaatgcactggattgcttatccatactgtgcaagagtagcttcttg
cggaagagagctcttctccaaatgatagagtgcgtttatcctttgctgtactatccatct
caatgggtaaggaaggcagtcgtcactttcatcgctgcctgtagtgaattcttaggtgct
gtcgactcttttgcctttatcgccccagtgatacgtccctttctcagtagacttcccgca
tcaattgcttctgaggaaggtttgttttcatgcctaaagcccccagtcacaagggaagcc
gtttaccgtatcttggaaactgccaggaaaccagaaatcgctgacaaacagcggaagata
tggtacagtacttcacctcagtctgggaccttgaacttgttagaacacggggccgaacag
aagaaaagcgtggaagggaaaaaaccgattatgaacgcattacagcagcaagaagttcaa
ggaaagtatgcagagaaagatgctaaactgagaatcccgagaaacccaagactcaatgct
tctaacacagttgagctccgtgatcacttgaatcaggagaagttacagttctctgggctt
atggcaccatacatgtctggtatgaataacgtaactgaaccagaggggatacctctctat
tcgtttaacatggacaaacgagcagccacgaatcctcctgtggcttctgagtcttcattg
cagatgaattctctgggcatgagttcgttgtcagtaccatggatggattccatgagcaag
tcgtttaacttggctagttcggttccagtgcctaagctagtttctggatcattccatgtt
ggcaccaatcctaaacagttttacagagtggtacatgagccagaaagcagagaaaacgag
caaatgtcctcagtcatcagcaagtttcaagacctcggtgtatccacctccttgaaaagc
gcttctgtgacttcagaagacgcgtcttcaatatcggatctcgtaggagaaccatcttcg
tcgaggacatcggttcctgattcaggttggaagcctcgtggagtattagttgctcatcta
caggagcaccgctctgcggtcaacgacattgccacttcaagcgatcatagctttttcgtt
agcgcatcagatgattcaacagtaaaggtgtgggactctagaaagctggaaaaggacatc
tcgtttaggtcaaggctaacgtatcatctcgagggaagcagagggatgtgcacaacaatg
cttaggaattcaactcaagttgtagttggagcctccgacggtgtgttacatatgttttcc
attgaccatatctccagaggcttggggaatgtggtggagaagtattcaggcattgttgat
atcaaaaagaaggatgttaaagaaggcgccttactttctcttttgaattatacctctgat
agcttatctggcccgatggtaatgtatagcacccaaaactgtgggatccacctttgggat
acaagatcagatatagatgcgtggacgctgaaagcaaaccctgaggaaggatatgtgtct
tctttggttacaagcccatgcgggaattggttcgtgtctgggtcttcaaggggagtgctt
actctttgggatttgaggtttcgtgttcctgtaaattcgtggcaataccctataatatgc
cccattgaaaagatgtgcctctgctttcttcctccaagcgcctcgctgtcttccacgatg
agaccttttatttacgttgctgctggtttcaatgaagtttcactctggaatgcagatgga
ggcatctgtcaacaggtatggagagtagccaactatgaaaatgagacgaatgtttccgag
tttcagtggaagctaccaagcagtaaggcaaatcccaaggcgaatattcgcaagaacatg
agctccaagtatagaattgaagagttgaacgagcctcctcctcgtcttcctggtatccgc
tcgttgcttcctttaccaggaggcgacttgttaacaggtggtactgacttgaagattcgg
cgttgggattactccagccctgagagaagttactgtatatgcggtccgagtttgaaggga
gttgtaaatgatgatttctacgaactcaaaaccaactctggagtgcaatttgttcaggag
acaatgaggcggcctctggcgaccaaactgacggcaaaggcagtacttgcagcggctgca
acagacacagcaggatgtcaccgtgactcagttcagtctctggcatcagtgaagctgaac
cagagactgttaatatcaagcagcagagatggagcgatcaaggtctggaagtaa
DBGET
integrated database retrieval system
