Brassica napus (rape): 106386204
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Entry
106386204 CDS
T04128
Name
(RefSeq) long chain acyl-CoA synthetase 1-like isoform X3
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bna
Brassica napus (rape)
Pathway
bna00061
Fatty acid biosynthesis
bna00071
Fatty acid degradation
bna01100
Metabolic pathways
bna01212
Fatty acid metabolism
bna04146
Peroxisome
Module
bna_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
106386204
00071 Fatty acid degradation
106386204
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106386204
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bna01004
]
106386204
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106386204
Enzymes [BR:
bna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
106386204
Lipid biosynthesis proteins [BR:
bna01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
106386204
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of breast milk
106386204
Exosomal proteins of breast cancer cells
106386204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Ribosomal_S15
Ntox4
Motif
Other DBs
NCBI-GeneID:
106386204
NCBI-ProteinID:
XP_022553840
LinkDB
All DBs
Position
C3:16194625..16202049
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AA seq
522 aa
AA seq
DB search
MKFFAAKLEEGVKGGNGKPSVGPVYRNLLSEKGFPPMDSDITTAWDVFSKSVEKFPYNKV
LGWRRIVDEKVGPYMWKTYKEAYGEVLQIGSAIRALGAEPGCRVGIYGVNCPQWIIAMEM
THEDVYLSFLPLAHILDRMNEEYFFRKGASVGYYHGDLNVLRDDIQELKPTYLAGVPRVF
ERIHEGIQKALQELNPRRRFIFNALYQHKLSWLNRGYSHSKASPMADFIAFRKIRDKLGG
RIRLLVSGGAPLSCEIEEFLRVTCCCFVVQGYGLTETLGGTALGFPDEMCMLGTVGIPAV
YNEIRLEEVAEMGYDPLGEIQAGEICIRGTCLFSGYYKNPELTQEVMKNGWFHTGDIGEI
HPNRVLKIIDRKKNLIKLSQGEYVALENLENIYGQNSVVQDIWVYGDSFKSMLVAVIVPN
PETVNRWAKDLGFTKPFEELCSLSELHDEHIILELKSTAEKNKLRKFEYIKAVTVETKPF
DVERDLVTATLKNRRNNLLKYYQSANVPLYRYKSTKCTENCR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttttcgcggcgaagctggaagaaggagttaaaggaggaaacgggaagccgtcg
gtaggtccggtgtaccggaatcttttgtcggaaaaaggttttccgcctatggattctgat
atcaccactgcttgggacgttttcagtaaatcagtggaaaaattcccttacaacaaggtg
cttggatggcgtcgaatcgtcgatgagaaggttggaccgtatatgtggaaaacttacaag
gaagcatacggagaagttctgcagattggttctgcaatacgtgctctgggagctgagcct
gggtgtcgagtggggatctatggagttaattgtcctcagtggataatagcaatggagatg
acacatgaagatgtgtatctttccttcttgccgttggctcatattcttgaccgtatgaat
gaggaatacttctttcgcaaaggggcttcggttggctattaccatggagatttgaatgtg
ttacgcgatgacattcaagaattgaaaccaacttatttagctggagttccaagagtgttt
gagagaattcacgagggaattcaaaaggctcttcaggaacttaatcctagaaggagattt
atcttcaatgctctctaccaacacaagctttcatggttgaatcgtggatactctcatagt
aaagcttcgcccatggctgatttcatagctttcagaaagattagagacaaattgggaggt
cgaatcaggttgctagtatctggaggagcaccattgagctgtgagattgaagagttcctt
agagttacttgttgttgctttgtcgtccaagggtacggtctaacggagactcttggagga
acggctttgggtttcccggacgagatgtgtatgctagggacagttggtattccggccgtt
tacaacgagatacgacttgaggaggtggctgaaatgggctacgacccactcggggaaatt
caggcaggcgagatctgtataagaggaacatgtttattttctggttattacaagaaccct
gaacttactcaagaagtcatgaaaaacggatggttccatacaggagatataggtgagatt
cacccaaatagagtactcaagataattgatcgcaaaaagaatcttatcaaactctctcaa
ggagagtacgttgctcttgagaacttggaaaacatctacggtcaaaactctgttgtccaa
gatatatgggtttatggagatagcttcaaatcaatgcttgtagcagtgattgttccaaat
cctgaaaccgtgaaccggtgggctaaagatctcggctttactaagccattcgaagaacta
tgctctctctcggaattacatgatgaacacatcattttagaactgaagtccacggcagag
aaaaacaagctaagaaagttcgagtatataaaagcagtgacagtggagacaaaacctttt
gacgttgagagagacttagtgactgcgaccctcaagaatcgaaggaacaatcttctcaag
tattatcagtccgccaacgttccgttatacaggtacaagtcgacgaaatgtaccgaaaat
tgtcgttga
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