Brassica napus (rape): 106386301
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Entry
106386301 CDS
T04128
Name
(RefSeq) tetratricopeptide repeat protein 27 homolog isoform X1
KO
K24935
tetratricopeptide repeat protein 27
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bna04990
]
106386301
Domain-containing proteins not elsewhere classified [BR:
bna04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
106386301
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GFIT
Motif
Pfam:
TPR_14
TPR_1
TPR_2
TPR_17
TPR_CcmH_CycH
TPR_19
TPR_16
TPR_8
TPR_11
TPR_15
DUF7017
Pro_CA_2
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
106386301
NCBI-ProteinID:
XP_048607972
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All DBs
Position
C3:4231405..4236246
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AA seq
872 aa
AA seq
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MVDGEIQILRGYELRLLRCTVSSPPSDSPPETHPQDSLINSFLSLIESGDYLGALGSDAT
KLILGDAELDLVDSVDSAERVYSELLEKVESFVVNGSSDGIDKARRAVMVMCLAIAAAFW
FTRCNLTGPTDGSTKCSLPFKVSEKSKELVEWENWAKIQLMSAGSDLLGKFSNLQHLVFA
RMLLLKLKDLYATETFELRSVSWWIVRVLLIHQRVLHERSSSLFDMLQVYMAEALDYFGD
LQKVETYWDDKLLEGEVSSITSTIHLEAFVLQYIYGRVDPCRLQLESAKAASKLELSVSG
AFGFRTIHQVEPKAQMVLVANTSSSNGDVRLASEKADVGSYYEAWGGEAPEVYMTPKLVN
DEGEAGKDSVTLKPVEQAMVLAQCLLIEKGSRSDEMQRWDMAPYIEAIDSQKSTYFTLRC
LCDLLRVRWESTRSRTKGRALEMVDKLVESINKSDPGASKRIPLCFAVHLPTIPALRKEY
GELLVSCGLVGEAITIFESLELWDSLIHCYCFLGKKSAAVDLINAQLLERPNDPRLWCSL
GDVTNNDSCYEKALEVSNDKSVRAKRALARSAYNRGDFEKSQMLWEAAMALNSLYPDGWF
ALGAAALKARDVQKAIDAFTFAVQLDPDNGEAWNNIACLHMIKKKSKESFVAFKEALKFK
RDSWQMWENFSHVAMDVGNIDQTFEAIQQILRMSKNKRIDVVLLDRIMTELENRNSACKS
SSSSVGSVETEPCAATPAETQRHLELLGKIIQQIVRTESTSEIWGLYARWSRIKGDLMVC
SEALLKQVRSYQGSEVWNDKERFKLFARASFELCRVYMEISVSTGSRRELFSAEMHLKNT
IKQATVSFTESEELKELESCLEEVRNVMKKDI
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacggcgaaattcaaatcctacgcggttacgagctccgtctcctgcggtgcacc
gtatcttcaccaccgtcagactctcctcccgaaacccatccgcaggactctcttataaac
tcctttttgtccctaatcgagtccggagactacctcggagctctaggctccgacgctact
aagctaatactaggcgacgccgagttggacctggttgactcggttgattcggctgagcga
gtttattccgagcttctcgaaaaggtggagtctttcgtggtgaacggttcgtcggatgga
atcgacaaggcccgccgggctgttatggtgatgtgcttagcgatcgcggctgctttttgg
ttcactcgttgcaatttgaccgggccgacagatggatcaacgaagtgttcgttaccgttt
aaagtatcagaaaaaagtaaggagttagttgaatgggaaaactgggcaaagattcagctc
atgtctgcaggctctgacttgctcggcaagttttctaatctccagcacttagtgtttgct
agaatgcttctgttaaagttgaaagatttgtatgctactgaaacatttgaactaaggagt
gtttcttggtggattgtgagagttttgcttattcatcaaagagttctacatgagcgatct
tcgtctttgtttgatatgttgcaagtctatatggctgaagctttagactattttggagac
ttgcaaaaagttgaaacctattgggatgacaagttgctggaaggagaagtttcatctata
acgtcaaccatccatctggaagcatttgtcttgcaatacatttatggaagggttgatccc
tgtaggttgcagcttgaatctgctaaagcagcatcaaagctggagctctctgttagtggg
gcttttggattccgtactattcaccaagtagagccaaaggcacaaatggtattggtagcg
aatacaagctcatccaatggggacgtgaggctggcctctgaaaaagctgatgttggatct
tattatgaagcttggggaggtgaagctcctgaagtatacatgactcccaaactagtgaac
gatgagggtgaagctggcaaagactcggtgacgttaaaaccagtcgaacaggcaatggtt
ttggctcagtgccttttaattgagaagggtagtcggagcgatgagatgcaaagatgggat
atggctccctatattgaggcaattgactctcaaaagtcaacatattttactctacggtgt
ttgtgtgacttactacgtgttcggtgggaatcaactcggagtcgtacaaagggacgtgcc
ctggagatggtggataaactggttgaatctatcaacaagagcgacccaggagcatcaaaa
aggatccctttatgctttgcagttcatctccctaccattcctgctttgagaaaggaatac
ggtgaacttctcgtgagttgcggtttggttggggaagcaatcacaatattcgagagcttg
gaattgtgggatagtctaattcactgctactgcttcctggggaagaaatcagcggctgtg
gatctcatcaatgcgcagcttttggaaaggccaaatgacccaagattatggtgttcactt
ggtgatgttacgaataatgactcctgttatgaaaaagccctggaggtttcaaatgataag
tcagttcgtgctaagcgtgctcttgctcgcagcgcatacaatcgcggtgatttcgagaag
tcgcagatgctgtgggaggctgcaatggccttgaattctctgtacccggatggttggttt
gctcttggtgctgctgcattgaaggctagggatgttcagaaagcaatcgatgcattcact
ttcgctgttcaacttgatcctgacaatggagaggcctggaacaacattgcttgtctgcat
atgattaaaaagaagagcaaagaatcattcgttgctttcaaagaagcgcttaagttcaag
cgagatagctggcagatgtgggagaacttcagccatgtagctatggatgtgggaaacatt
gatcagacctttgaagctatacaacagatactgagaatgagcaaaaacaagaggattgat
gttgttttattagaccgtataatgacagagttagaaaataggaattcagcatgtaagtca
tcatcttcatcggttggatcagtagaaacagaaccgtgtgctgcaacaccagctgaaact
cagcgtcacttagagttgcttgggaaaattattcagcagattgtccgaacagaaagtaca
tctgaaatctggggattatatgcaagatggagtagaatcaaaggagatcttatggtatgc
agtgaggcactgttgaagcaagtgcgatcatatcagggatcagaagtgtggaatgacaaa
gagcgtttcaagttgtttgcaagagcatcattcgagctttgcagagtctacatggagatc
tcagtgtccacaggaagcaggcgagaactctttagtgctgagatgcatttgaagaacaca
atcaaacaagccacagtgagcttcacggagagtgaagaactgaaggagcttgaaagttgc
cttgaggaggtgagaaatgttatgaagaaagatatttga
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