Brassica napus (rape): 106386571
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Entry
106386571 CDS
T04128
Name
(RefSeq) protein PIR
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106386571
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106386571
Factors involved in mRNA localization
Other mRNA localization factors
106386571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
106386571
NCBI-ProteinID:
XP_013681863
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All DBs
Position
C3:complement(4558060..4565495)
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AA seq
1282 aa
AA seq
DB search
MAVPVEEAIAALSTFSLEDEQPEVQGPAVMVSAERAATDSPIEYSDVAAYRLSLSEDTKA
LNQLNTLIQEGREMASILYTYRSCVKALPQLPESMKHSQADLYLETYQVLDLEMSRLREI
QRWQSSASAKLAADMQRFSRPERRINGPTVTHLWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSAQWQDTDTMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIV
FIVESLELDFALLFPERYILLRVLPVLVVLATPSEKDTEALYKRVKLNRMINIFKNDPVI
PAFPDLHLSPAAILKELSVYFQKFSSQTRLLTLPAPHELPPREALEYQRHYLIVNHIGAL
RAEHDDFTIRFASSMNQLLLLKSNDGAYTEWCREVKGNMYDMVVEGFQLLSRWTARIWEQ
SAWKFSRPCRDAAETQEASGSYSDYEKVVRYNYTAEERRALVELVGYIKSVGSMLQRCDT
LVADALWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTRPEHEM
PSSQHGGDESKANFFYPRPVAPTAAQVHCLQFLIYEVVSGGNLRRPGGFFGNNGSEIPVN
DLKQLETFFYKLSFFLHILDYSASIGILTDLGFLWFREFYLESSRVIQFPIECSLPWMLI
DHILESPNSGLLESVLLPFDIYNDSAQQALVVLRQRFLYDEIEAEVDHGFDIFVSRLSES
IFTYYKSWSASELLDPSFLFALDNGEKFSIQPVRFTALFKMTKVKILGRTINLRSLIAQR
MNKTFRENLEFLFDRFESQDLCAVVELEKLIDILKHSHELLSQDLTIDPFSLMLNEMQEN
ISLVSFSSRLATQIWSEMQSDFLPNFILCNTTQRFVRSSKVPPTQKPSVPSAKPSFYCGT
QDLNAAHQSFARLHSGFFGIPHLFSIVKLLGSRSLPWLIRALLDHISNKITTLEPMISGL
QEALPKSIGLLSFDGGVAGCMRLIREQLNWGTKAELKTEVLRGIKEIGSVIYTMGLLDIV
LREVDTKRFMQTAPWLGLIPGAEGQIVNAQEGESPLVNLLKSATSAVVSSPGCLNPAAFY
TMSKQAEAADLLYKANMNGGSVLEYTLAFTSASLDKYCSKWSAPPKTGFVDITTSKDFYR
IYGGLQIGYLEEITVPQSGQQEVLGDSIAWGGCTIIYLLGQQLHFELFDFSYQVLNVSEV
ETVSASHTHRNPQVLQGWEGLLEGMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPL
PRVRFENTVSAFESLPQKGTVG
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcctgtggaggaagcaatcgcagctctttctactttctcattagaggatgag
caaccagaagtgcaaggaccagctgtgatggtttcagctgaaagagctgcaactgatagt
cccatcgagtatagtgatgttgcagcgtaccggttatctctttcagaagacacaaaagct
cttaaccagctgaacacgcttatacaagaaggaagagagatggcgtcaattctatataca
tatagaagctgcgtcaaagcattgcctcagcttccagaatctatgaagcatagccaggca
gatttgtatctagaaacatatcaagttttggacctagaaatgagccgtttacgagaaatt
cagagatggcaatcctcagcttcagctaaactagctgctgacatgcagaggttttccaga
cctgaacggcgaatcaatggtcccacagtcacacatctgtggtcaatgctaaagttgctt
gatgtcttggttcagcttgatcatcttaaaaatgctaaagctagcattcctaatgatttc
tcttggtataaaagaacattcactcaagtcagtgcacagtggcaagatacggatacaatg
agagaagagttagatgacttacagattttcctgagcacaagatgggctattttactcaac
ttgcatgttgagatgttccgcgtgaacaatgtggaagacattctccaagtactcatagtc
ttcattgttgagtcgctggagttggatttcgcccttcttttccccgagaggtatattctt
ctccgagtcttgcccgttcttgttgtgttagcaacgccatcggagaaagataccgaggct
ttatacaagcgggtaaaactcaacagaatgatcaacattttcaagaatgatcctgtcatt
cctgcgtttccagatctccatctttctcctgctgcaattttgaaagaactgtcagtatac
tttcaaaagttttcatcacagactcgccttctgactcttccagcacctcatgagctccct
ccacgtgaagcgctagaatatcagaggcattatttgatagttaaccacattggagctctc
cgtgctgagcacgacgatttcacaatccgatttgcttcatccatgaatcagttattgctg
ttgaagtcaaatgatggagcatacactgaatggtgcagagaggtgaaaggaaacatgtat
gatatggttgttgaaggtttccagctgctaagcagatggactgcacgcatctgggagcaa
tctgcttggaaattctctcgcccgtgtagggatgcagctgagacgcaagaagcctccgga
tcatattctgattacgagaaggtggtgaggtacaattacactgcagaagaaaggagagcc
ttggtagaacttgttggctatataaagagtgtaggatcgatgctgcagcgctgtgacacg
ttagttgcagatgctttatgggagacaatacatgctgaggttcaagattttgtacaaaac
acgttagccacgatgttgcgtaccaccttccgaaagaagaaagatctctcaaggattctt
tctgatatgcggactctttcagctgactggatggcaaacaccaggcccgaacatgagatg
ccgtcttcacaacacggaggtgatgaaagtaaagcgaacttcttctatccgaggccagtt
gccccaacagcagcacaggtgcattgcttgcagtttttgatatatgaggttgtctctggt
gggaatctgaggaggccaggagggttctttggaaataatggctccgagattcctgttaat
gacttaaagcaacttgagactttcttttacaagctcagcttttttctccacatattggat
tactcagcaagtattggaatattgactgatcttgggttcctgtggtttcgagaattttac
ctggagtcttcacgtgttattcagttcccaattgaatgttcactaccatggatgctgata
gaccacattctcgaatccccaaattcaggccttcttgagagtgttctgctgccttttgac
atttataatgactcagctcaacaagctctggttgtgcttaggcagaggttcctctacgat
gaaattgaggctgaggtggaccatggttttgatatatttgtatcaagactctcggagtct
atattcacatattacaagagctggtcagcaagtgagcttcttgatccatcatttctcttt
gccttggacaatggtgaaaagttctccatccagcctgtgaggtttactgcgttgtttaag
atgacaaaagtaaagatacttggtagaacaattaatttaagaagtttgatcgctcaaagg
atgaataaaacttttagagagaatctggagttcctctttgatcgttttgagtcccaggac
ctatgtgctgtagtggaactggagaagctcatagatatcctaaagcattcgcatgaactg
ctttcacaagatcttacaatagatcctttcagcctcatgctgaatgaaatgcaagaaaac
atctcgcttgtctcattttccagccgacttgctacacagatatggtcagagatgcagagt
gacttcctaccaaacttcatactttgcaataccacacagagatttgtccgctcctcgaag
gttcctcctactcaaaaaccctcagtgccttctgctaagcctagtttctactgtggcact
caagacttaaatgcagcacatcaaagctttgcacggttgcacagtggatttttcgggata
ccacatttattttccatagttaaacttcttggatccagatcactgccctggcttataaga
gcgttactggatcatatatcaaataagataacaacactagagccaatgatatctggattg
caagaagcattgcctaagtctatcggattgctgtctttcgatggtggtgtcgcaggctgt
atgaggcttattagagaacaactaaactggggcacaaaggcagaactcaaaacagaagtt
ctgcgtggaataaaggaaattggaagtgtgatatatacaatgggacttctcgacatcgta
ttgagagaagtagacacaaagcgtttcatgcaaacagctccatggttgggattaatccct
ggcgcagaaggacagatagttaacgctcaagaaggcgaaagcccactagtcaatctccta
aagtcagcgacttctgctgttgtgtcaagtcccggttgtcttaatccagcagcgttctac
accatgtcaaaacaagcagaagctgcagatcttttgtataaggcaaacatgaacggtgga
agcgttcttgaatacacacttgcattcacaagcgcttcgcttgacaaatactgtagtaaa
tggagtgctcctccaaagacgggattcgtcgatatcacaacttcaaaggacttttaccgc
atttacggtggtcttcagattggatatctggaggagataacagttccacaatcaggtcaa
caagaagtcctcggagattctatagcttggggtggttgcactatcatttacctgctcgga
cagcaacttcactttgagttgtttgatttctcgtaccaagtactcaatgtctctgaggtt
gaaactgtatccgcttcacatactcataggaatcctcaagttctccagggatgggaaggt
ttgttggaagggatgaagaaagctcggaggctgaacaaccatgtcttctccatgctcaaa
gctcgttgtccactcgaagacaaaacagcttgtgccattaaacagagcggcgcaccgtta
ccacgtgtcaggtttgagaatacagtgtctgcctttgagtctctgcctcagaaaggaacc
gttggctga
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