Brassica napus (rape): 106386904
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Entry
106386904 CDS
T04128
Name
(RefSeq) ABC transporter F family member 1-like
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106386904
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
106386904
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_22
RsgA_GTPase
AAA_15
MMR_HSR1
AAA_23
AAA_14
AAA_16
AAA_28
Zeta_toxin
ATP-synt_ab
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
106386904
NCBI-ProteinID:
XP_013682180
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All DBs
Position
C3:5814038..5817130
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AA seq
594 aa
AA seq
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MVSDASKKKALQKKAAAAAKRGGKAAAAKAAASSSNGADSLSSGVDALQISDRTCTGILC
SHPQSRDIRIESLSVTFHGYDLIVDSMLELNYGRRYGLLGLNGCGKSTLLTAIGLRELPI
PDHMDIYHLSHEIEATDMTSLEAVMSCDEERLKLEKEIETLVEQDDGGGERLDTIYERLE
AMDASTAEKRAAEILFGLGFDKEMQAKKTKDFSGGWRMRIALARALFIMPTILLLDEPTN
HLDLEACVWLEESLKNFDRILVVVSHSQDFLNGVCTNIIHMQSKQLKYYTGNFDQYCQTR
SELEENQMKQYRWEQEQISHMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVAR
DSVLVFRFADVGKLPPPVLQFVEVSFGYTPDYLIYKNIDFGVDLDSRVALVGPNGAGKST
LLKLMTGELQPTEGMVRRHNHLKIAQYHQHLAEKLDLEVPALIYMMNEFPGNEEEKMRAA
IGRFGLTGKAQVMPMKNLSDGQRSRVIFAWLAYKQPNMLLLDEPTNHLDIETIDSLAEAL
NEWDGGLVLVSHDFRLINQVAHEIWVCEKQCITKWNGDIMDFKKHLKAKAGLED
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgacgctagcaagaagaaggctctccagaagaaagccgccgccgccgccaaa
agaggcggtaaagccgccgccgctaaagccgccgcctcttcttcaaacggagctgatagt
ttgtcgagcggcgtcgatgctcttcagatatccgaccggacctgtaccggaatcctctgc
tctcatcctcagtccagagacattcgtattgaatctctgtctgttacgtttcatggttac
gacctgattgttgattcgatgctggagcttaactacgggagacgctacggtcttctcggg
ctgaatggttgtgggaagtctactctcttaaccgcgattggacttagagagcttccgatt
cctgatcacatggacatctaccatctctcccacgagattgaagccaccgacatgacttct
ctcgaggctgtcatgagctgtgacgaggagaggttgaagctggagaaggagattgagact
cttgttgagcaggatgatggaggcggagagcgtcttgacacgatctatgagcggttagaa
gccatggatgcttcgacggcggagaagcgtgctgctgagattctgtttggtcttggtttc
gacaaggagatgcaggctaagaagacgaaagacttttctggtgggtggaggatgaggatt
gcgttggcgagagctctcttcattatgcctactatccttttgcttgatgagcccacaaat
catttagatttggaagcttgtgtctggttagaggagagcctgaagaactttgaccgtatc
ctcgtcgtggtctcccactcacaggattttttgaacggagtctgcaccaacatcatccac
atgcaaagcaagcagctcaagtactacaccggtaacttcgaccagtactgccagacacgt
tccgagctagaagagaatcagatgaaacagtacagatgggagcaggagcagatctcccac
atgaaggagtatatcgcccggttcggtcacggttcagccaaactcgcccgccaagcgcag
agcaaggagaagactttggccaagatggagagaggtgggctcacggagaaggtggcgaga
gacagtgtcctcgttttccgttttgctgatgttgggaagcttccaccgccggtgcttcag
tttgtggaagtctcgtttgggtacactccggactaccttatatacaagaacatcgacttt
ggtgttgatttggactcgagggtggctcttgttgggcctaatggagctgggaagagtact
ctcttgaagctcatgactggcgagctgcaaccaactgaaggaatggtgaggcgtcacaac
cacttgaagattgctcagtaccatcagcatctagctgagaagctggaccttgaagtgcct
gcgcttatctacatgatgaacgagtttccgggtaacgaagaggagaagatgagagctgct
attggtaggtttggtctgaccggtaaggcgcaagtgatgccgatgaagaatctgtctgat
gggcagaggagccgtgtgatattcgcgtggctggcttataagcagcctaacatgctttta
ctggatgagccgactaatcatttggatattgagacgattgattctcttgctgaggcgttg
aacgagtgggatggtggtttggttctggtgagtcacgacttcaggttgattaaccaagtg
gctcatgagatatgggtgtgtgagaagcagtgcatcactaaatggaatggtgatattatg
gacttcaagaagcatctcaaggctaaagctgggcttgaagactga
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