Brassica napus (rape): 106386925
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Entry
106386925 CDS
T04128
Name
(RefSeq) DDT domain-containing protein PTM isoform X1
Organism
bna
Brassica napus (rape)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chromo_PTM
DDT
PTM_DIR17_Tudor
WHIM1
PHD
DUF8799
C1_2
Motif
Other DBs
NCBI-GeneID:
106386925
NCBI-ProteinID:
XP_013682200
UniProt:
A0A816I465
LinkDB
All DBs
Position
C3:5704818..5710985
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AA seq
1521 aa
AA seq
DB search
MEGKVGRPRGRPRKRTRPEDQNGVSSNRGKRIALEIKPAVPRSLLCRYVLKDFDESRVSL
GKVVSYSSGLYRVEYEDGCVEDLKSCHLRQLIIEDSYFDDELRCRRDKLDALLKLELQNK
VNGAEVPTCSTSSGSVAEEGGGEDRRDPDLETMSPLVPVPAVDLPCSSGTIGVPEEGVMH
LLSVYGFLRSFSVQLYIYPFGLDEFVGALNFLGPSSLVDAVHVALMKALKGRLERLSSDE
SVVASNCLRCIDWSLLDALTWPVYLVQYFSAMGHARGPQWSVFYEFVVKKEYYSLPVVMK
LKILQILCDDVFDVADLRAEINTREESEVGYDPDGVTADLPENRPRRVHPRFAKTSACKE
KEISEFVPVNHAISSMVESKSLSGGPNGVSSDLDGNSDECRLCGMDGTLLCCDGCPLAYH
SRCIGVLKMYIPDGPWHCPECTINKMGPTIAHKTSLRGAVYFGVDPHGRLFLGTCNHLLV
LKIYADADIKYYSVTDIPKVVTVLLSATNHRLEYLYICKEISQYWDLPGGVVAHLRAVET
DLVSHIQKGDEEVSDLSKPENASSFIIQWASASGYVGGSNLGRSSGTHEKNLLAGITHKG
STFKPHAYINHYTNGELAASAATTMAVLLSEETHEPDQHKFSNTKKAASSNILLQVKAFS
LVASSFFWPSPDKKEITRERCGWCHSCKLTSASRRGCMLNAAVTGATRSAVKIFSGLFPL
KNGDGVLSSIAAYILYLEESLRGLIVGPFLSESLREQWRKKLEEASTCKAMKALLLELEE
NVCSIALSSGWLKLMDDWLIEHSIFQSVRVTVGATQKRGPGKKRQKNQAEVTAEVSNDDS
FTWWRGGKLSKVILLKAVLLKPTIRKAAWQGGVKKFPEFNYGDGSHIPKRSRRSIWKAAV
ESSKNISQLALQVRYLDKNIRWSELVRPEQNVQDVKAGPETEASVFRNASIRDKKIIDKK
VRYGVAFGNQKHLPSRVMKNVIEVEKTEDGNEKFWFAEARVPLYLIKEYEESLRRVHVPF
IKKQSERLSKLQRKQLKASRANIFSYLASRRDKTEKCSCASCHLDVLLRDATTCSSCQGF
CHKECTSMSTQHIAGKVETLVTCKRCYLARARSLITINHRHPTTPTVLINGQHQNAVTPV
TKTQIKPLVKQIPSSNTGDKASGVKQVTPDSNMAPMSQHKTLSWGVIWRKKNSDDTGASF
RRQNVVLAAQSDQPNPGPVCWLCKLPYNHGQTYIHCTSCDKWYHIEAIKLEESKIHEVAG
FKCCRCRRIRAPDCPYMDPKLKEERQKRNAFFQRQRHKKGNTRTDSDSEIMSEPRDSVPS
TPSFPLEDGFVPKDLDVEWNGDGSVPGPQKLPVKRQVKREDTEGNNNLSYIDFSTHLESV
PFVRPEMEPTLPVMECNASDSYNNNELMFDYEDMEFEPQTYFSLTELLTADDNGQCNGYG
YDKDALGNADNPNPQVETMGQWRAFLNDDTKPCQICMHVEPGADLTCQTCNITIHSHCSP
WEEESTCTRGNWRCGPCREWM
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atggaagggaaggtgggtagacctagaggaagaccaaggaagcgcacaaggccagaggat
cagaatggtgtctcctctaaccgaggaaagaggattgctttggagattaaacctgcagtg
ccaagatccttactttgtcgttatgtgttgaaagattttgatgagagcagagtttctctc
gggaaggtagtttcctacagctcagggctgtacagagttgaatacgaggatggttgtgtt
gaggatttgaaaagttgtcatcttcgtcagttgattatcgaggatagttactttgatgat
gagttacgttgtagaagagataaactagatgcgttactgaagctggagctgcaaaataaa
gtaaatggagctgaggtgcctacatgtagtactagctcaggctctgtggcggaagaggga
ggtggtgaagataggagagatccagatttggaaactatgtctcctcttgttccggttccg
gcggtggatttgccttgttcttcaggaacaattggtgtccctgaggagggtgtaatgcat
ctgttatctgtatacgggttcttgagatcgttcagtgttcagttatatatctacccgttt
gggttggatgagtttgtgggagcgttgaatttcttaggaccgagttctttggtggatgcc
gttcatgttgccttgatgaaggcactcaagggtcgtcttgagagactgtcctcagacgag
tctgtagtggcttcaaactgcttgaggtgcattgattggagcttgctcgatgcgctaact
tggcctgtttatttggttcagtacttttctgccatgggacatgcacgtgggcctcagtgg
agtgttttctacgaatttgttgtgaagaaagagtattattccttacctgtagtgatgaag
ttgaagatcctgcaaattctgtgtgacgatgtttttgatgtagcagatttaagagctgaa
atcaatactcgagaagaatctgaagttggatatgatcctgatggagttactgctgatctt
cctgaaaatagacctagacgtgtccaccctagatttgctaaaacctcagcttgcaaggag
aaagagattagtgaatttgttccagtgaaccatgcgataagctcaatggtcgagtcaaaa
agtttgagtggtggtcctaatggagttagctcagatctggatggaaacagtgatgaatgt
aggctctgcggcatggatggaacgttgctgtgttgtgatggatgccctttagcatatcac
tcaagatgcatcggcgtcctcaaaatgtatatacctgacggtccgtggcattgtccggaa
tgcactattaacaaaatggggccaacgattgctcataaaacgtcactaaggggagcagtg
tattttggagtggatccacatgggcggctcttcttgggtacatgcaaccacttacttgtg
cttaaaatttatgcggatgcagatattaaatactacagtgtcactgacattccaaaagtt
gtaacggtcctcttgtctgcaacgaaccatagactggaatatctgtatatatgcaaagag
atctcacaatactgggatctgcccggaggtgtggtcgctcatttaagagcagtggagact
gatttagtatctcacattcaaaaaggggatgaagaggtgtcagacctgagtaagcccgag
aatgcaagtagtttcattattcaatgggcatctgcttcaggctatgttgggggttctaat
ttgggtagatcaagtggaacgcatgagaagaatctgcttgccggcattacacacaagggt
tcaacatttaaacctcacgcgtacattaatcactacacaaatggagaattagctgcatca
gctgctactactatggctgtcctattgtcagaagaaacacatgaacctgatcaacacaag
tttagcaacaccaagaaagctgcctcgagtaacattttgctgcaggtgaaagcattttca
ttagtagcctcgagtttcttctggccaagtcctgataagaaggaaatcaccagggaaagg
tgtggctggtgtcattcttgcaaactcacatcagcaagtaggagaggatgcatgttaaat
gcagctgtaacaggggccaccagaagtgctgtgaaaatctttagtggcctttttcctctg
aagaacggggacggggtgctttcgagtattgcagcatatatactatatctggaggaaagc
ttacgtggtctcattgtggggccgtttctcagtgagagtcttagggaacagtggcgtaag
aagttagaggaggcctcaacatgcaaagcgatgaaagccctcctgcttgaacttgaagaa
aatgtttgcagtattgctctgtcaagcggttggcttaaactaatggatgattggttgata
gaacattctatttttcaaagcgttcgagttactgttggggccacacagaaacgtggacct
ggaaagaagaggcagaagaaccaggctgaagttacagccgaagtatctaatgatgatagc
ttcacttggtggcgaggagggaaactatcaaaagttatactcctgaaggcagtcttgttg
aagccaacgataaggaaagcagcttggcaaggtggtgtgaaaaagtttcctgaatttaat
tacggtgatggttctcacattcctaaaagaagcaggcggtctatttggaaagctgcagtt
gaaagtagcaaaaacatttctcagcttgctcttcaggttaggtaccttgacaagaacata
agatggagtgaacttgtacgcccagagcaaaacgtgcaagatgttaaggcaggtccagag
acagaggccagtgtttttaggaacgctagtatacgtgacaaaaagattatagataaaaag
gttagatatggagttgcctttggaaatcagaagcaccttccgtctcgtgtcatgaagaac
gtcatcgaagtcgagaaaactgaagatgggaacgaaaagttttggtttgctgaagcacgc
gttcccttatatctgatcaaagaatatgaagaaagtttacgtagggtccatgtgcctttt
atcaagaagcaatcagaaagattgtcaaagctacagagaaagcaactgaaagcttctcga
gcaaacatattttcttatctagcctctaggagggacaagacggagaagtgctcttgtgcg
tcatgccatcttgatgttttgttgagggatgcaacgacatgcagttcatgccaaggtttc
tgtcacaaggaatgtactagtatgagtacacaacacatagctggaaaggttgaaactctg
gtaacctgcaaacggtgctaccttgcaagagctcgttcactaatcactatcaatcacaga
catccaacaacacccactgtcctgatcaatggacaacatcaaaacgcagtcactccagtc
actaagacacagattaagcctcttgttaagcagataccatcttccaacacaggcgacaag
gcttcaggagttaaacaagtcactcctgattctaatatggcacccatgagtcaacacaag
acattgtcttggggtgtcatatggaggaagaagaactcagacgacacaggtgctagcttc
agacgtcagaatgttgtgttggctgcacaatctgatcagccgaatccaggaccagtttgt
tggctatgcaaactaccgtataatcacggtcaaacgtacatccactgtacaagctgtgac
aagtggtaccacattgaagcgattaaactcgaggagtcaaaaattcatgaagttgctggg
ttcaagtgttgcagatgccgtcgtatacgagcaccagattgtccttacatggatcccaaa
ctcaaggaagagagacagaagagaaacgcattcttccagcgccagagacataagaaagga
aataccagaacggattctgattctgaaataatgtctgaaccaagagactcggtaccctct
actccctcgtttcccctcgaagatggctttgttcctaaggatctggatgttgaatggaat
ggcgatggttctgtgccgggaccccagaagctaccagttaagagacaagtcaaacgtgaa
gacacagaagggaacaataatctttcttatatagacttttcaacgcatctagaatcagtg
ccttttgtgagaccagaaatggagccaacattgcctgtcatggaatgtaatgcatctgac
agctacaacaacaacgagctaatgtttgactacgaagacatggaattcgaaccccaaacc
tatttctcgctgaccgagttgcttacagcagatgataatggccagtgcaatggatatggc
tatgacaaggatgctttaggaaacgctgataacccaaaccctcaggttgagacaatggga
cagtggagagcatttctcaatgacgatacaaaaccatgtcagatatgtatgcatgtggag
ccaggggctgatctcacatgccagacttgtaatatcacaatacattcccactgctctcca
tgggaggaggaatctacttgcaccagaggtaactggagatgcggtccctgccgtgagtgg
atgtag
DBGET
integrated database retrieval system
