KEGG   Brassica napus (rape): 106386926
Entry
106386926         CDS       T04128                                 
Name
(RefSeq) DNA repair protein RAD5A
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bna03400]
    106386926
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    106386926
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_2 DEAD Prok-RING_4 RING_XB3-XBAT31 zf-C3HC4_4 zf-RING_5 ResIII zf-RING_4 zf-ANAPC11
Other DBs
NCBI-GeneID: 106386926
NCBI-ProteinID: XP_013682202
UniProt: A0A816HXD2
LinkDB
Position
C3:complement(5699196..5704565)
AA seq 1025 aa
MGTKVSDDLLSTVRSVVGSDYSDMDIIRALHMANLDPTAAINIIFDTPSFSKPNDIAAAA
AANSTPRAVNGGRRVEDGLKVCPFSEGANHHRVEEEVDESVSGDECWWFVGCSELSGLST
CKGRRLKAGDELLFTFPSSKALKSETTTPGKRFGRGRPSARNVSDIVRFSTKDSGEIGRI
PNEWAKCLLPLVRDKKVRIQGRCKSAPESLGIMDTILLSVSVYINSSMFQKHSTTSLKVA
SNTAEESTFHPLPNLLRLLGLTPFKKAEFTPEDLSTRKRPLSSKDPVSTSLLQLNKVKKL
NQDAEGDENEHCISDGDLDNIVGVGDSSDLQEMETPRKLLCELRAYQKQALHWMTQLEKG
NCTDEAATMLHPCWEAYYLADKRDPVIYLNSFTGDATIHFPSTLQMARGGILADAMGLGK
TVMTISLMLAHSWKAASTGFQCPINEGDKGISSSVDESTSPSVKATKFPGFDKKLLEQQT
ALENGGNLIICPMTLLAQWKSEIEMHAKPGSLSVYLHYGPDRPKDVKLLTQSDVVITTYG
VLTSEFFAENSAKSEGLYAVRWFRIVLDEAHTIKNSKTQVSLAAAALVSDRRWCLTGTPI
QNTLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEGDERGLKLVQSILKPIMLRRTKSST
DRDGRPILVLPPADARVIYCELSESERDFYDALFKRSKVKFDQFVQQGKVLHNYASILEL
LLRLRQCCDHPFLVMSRGDTAQYSDLNKLAKRFLGGKSCGLEKEGKDVLPSVAFVQEVVE
ELSKGEQGECPICLEAFEDAVLTPCAHRLCRECLLASWRNSSSGLCPVCRKTVSKQELIT
APTESRFQVDVEKNWVESSKITALLQELESFRSSGSKSIIFSQWTAFLDLLQIPLSRNNI
SFVRLDGTLNQQQREKVLKEFSEDGSIMVMLMSLKAGGVGINLTAASNAFVMDPWWNPAV
EEQAVMRIHRIGQTKEVKIRRFIIKGTVEERMEAVQARKQRMISGALTDQEVRSARIQEL
KMLFT
NT seq 3078 nt   +upstreamnt  +downstreamnt
atggggacgaaagtttcagacgatctgctctccaccgtcagatcagtcgtgggatccgat
tactcagacatggacataatcagagcccttcacatggcgaatctcgatccgacggcagcc
atcaatataatcttcgacactcccagtttcagcaaacctaacgacatcgccgccgccgcc
gccgctaattctaccccgagggcggttaatggagggaggagagtcgaggacggcttaaag
gtctgtccttttagtgagggagcgaatcatcatcgcgtggaggaagaagtagatgagagt
gtttcaggggatgagtgttggtggttcgtgggctgttccgagttgtcgggattgtctaca
tgtaaaggaaggagattgaaggctggtgatgagctgttgttcacgtttccgagtagtaaa
gcgttaaaatccgagactacgacgcctgggaagcgctttggaaggggaaggccaagtgcg
cgtaatgtttctgatatcgtcaggttctctacaaaggactcaggagagattggtaggata
ccaaatgagtgggctaagtgtcttctaccgcttgtgagagacaagaaggttaggatacaa
gggagatgcaagtcggcgcctgaatcattaggcattatggataccattcttctttcagta
agcgtatacattaatagttccatgtttcaaaagcatagtacgacttcacttaaggtagcc
agtaatacggcagaggaatcaacattccatcctctcccaaacctcttgcggttactcggt
ttgactccctttaagaaggcagagtttactcctgaggatttgtccactaggaagcgacct
ttgagttccaaggatcccgtttctacttcgttgcttcaactaaacaaggtcaagaagctt
aatcaagatgcagagggagatgaaaacgagcactgtatcagcgatggtgatcttgataac
attgttggtgttggggacagttctgatttacaggaaatggaaactccacgtaaacttctg
tgtgagcttcgtgcttatcaaaagcaagcacttcactggatgacccaactggagaaagga
aattgcactgatgaggcagcaacaatgcttcacccatgttgggaagcatactatttagca
gacaagagggatcctgttatctacctgaactctttcactggtgatgctacaatacacttt
cctagcacacttcaaatggcaagaggaggaattctagcagacgcaatgggtctcgggaag
actgtaatgaccatatcccttatgcttgcacattcatggaaagctgcctcaactgggttt
caatgccccattaatgaaggcgacaaagggatcagcagttctgtagatgagtctactagt
ccttcagtgaaggcaactaaatttccaggttttgataagaagcttctggaacagcaaact
gcccttgaaaatggtggtaacctaattatatgtccgatgacacttttagcccagtggaag
tcagagattgaaatgcatgctaagcctgggtccctatctgtatatcttcattatggccct
gacaggccaaaggatgttaaacttctaacccagagtgatgttgtcatcaccacatatggg
gttctaacatccgagtttttcgcagagaactcagccaagagcgaaggactttatgcagtt
cgttggtttaggattgttcttgatgaggcacataccatcaaaaactcaaaaacccaagta
tcgttggctgcagcagctttggtttctgatcgacgttggtgtcttacgggtactcctatc
cagaatactttggaggatttatatagccttctacgatttttgaggattgaaccatgggga
acttgggcatggtggaataaacttgtccaaaagccatttgaagagggagatgagagaggg
ctaaagctagtacagtctattttaaaacctatcatgcttaggagaaccaagtctagcaca
gatcgagatggacgaccgattcttgttctaccccctgctgatgcaagggtcatttactgt
gagctctcggagtccgagagggatttctacgatgcgctgtttaaacgatcaaaggtgaaa
tttgatcaatttgttcaacaagggaaagttcttcataactatgcttcgatcctggaactg
cttctgcgtcttagacagtgttgcgatcacccatttctagtaatgagtcgaggtgataca
gcgcagtactctgatctgaataagctcgctaaacgttttcttggtggaaagtcttgtggt
ctagagaaggaaggcaaagatgtactaccatcagtggcttttgttcaggaggtggtagag
gaactgagcaaaggagagcaaggagagtgtccaatatgcctcgaagcgtttgaggatgcg
gttttaacaccgtgtgctcatcgattgtgtcgtgagtgtctcttggcaagttggcgaaac
tcttcttctgggttatgtcctgtgtgtaggaaaactgtaagcaaacaagaactcatcaca
gcaccaacagaaagtagattccaggtggatgtggagaagaattgggtagaatcatcgaaa
atcactgctcttctgcaagagcttgaaagttttcgttcttcagggtctaagagcattatc
tttagccagtggactgcttttctcgatctcctccaaattcccctctctcggaacaacatt
tcatttgtgcgtctggatggaacgctaaaccagcagcaaagagagaaagtccttaaagag
ttttctgaagatggcagtatcatggtaatgttgatgtctctaaaagctggtggtgttggg
ataaatctaacagctgcgtccaatgcttttgtcatggatccatggtggaacccagcagta
gaggaacaagctgttatgcgtatccatcgtataggacagactaaggaagtcaaaatcaga
agattcatcatcaagggaacagttgaggagaggatggaggcggttcaggcgaggaaacag
agaatgatctctggggctttaaccgatcaagaagtacgaagtgcacgtatacaggaactc
aagatgttgtttacctga

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