Brassica napus (rape): 106386960
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Entry
106386960 CDS
T04128
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8-like
KO
K21343
ubiquitin carboxyl-terminal hydrolase 15 [EC:
3.4.19.12
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bna01002
]
106386960
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106386960
04121 Ubiquitin system [BR:
bna04121
]
106386960
Enzymes [BR:
bna01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106386960
Peptidases and inhibitors [BR:
bna01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106386960
Membrane trafficking [BR:
bna04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
106386960
Ubiquitin system [BR:
bna04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106386960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
Motif
Other DBs
NCBI-GeneID:
106386960
NCBI-ProteinID:
XP_048608097
LinkDB
All DBs
Position
C3:complement(5472322..5479603)
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AA seq
871 aa
AA seq
DB search
MSVASTSEESPDSAQRIDSFNGEQSVYFVPFRWWKDAQESVPCESVEKREILYTAATTGS
SYGGPMKLINNIFNSDILFDLRREGDDALQSNDTGEASVSGRDFALVSSDMWLQALKWHH
NDKINEKGVKSFSTGGVDRGDVYPVQLRLSVLQETNSLAVKICKKDNSVECFRRACKIFS
LDSEQLRIWDISGQTTLFFQKDMNNSKACQQQTDQEILLELQIYGLSDSINLKESKKEDG
STHQTNGITNGTTFRFGRSHSLSFLGKAGEAGTLGLTGLQNLGNTCFMNSSLQCLAHTPK
LVDFFLGEYIREINLENPLGMKGEIALAFGDLLRSLWAPGASTVTPRTFKAKLGRFAPQF
SGFNQHDSQELLAFLLDGLHEDLNRVKNKPYVEAKDGDGRPDEEVADEYWRNHMARNDSI
IVDVCQGQYKSTLVCPICKKVSVMFDPFMYLSLPLPCTSIRTMDLTVMSADGGSLPVSVT
VNVPKFGKFEDLQKALVTACSLPEDETLMVTEVYNNRILRVLEDPSDSLSLIRDGDKLVV
YRLKKDANDSPLIVFMHQKLEEQFICGKSSPTWKGFGIPLVSRLCDVENGFDVEKMYLKL
LSSFKMPSEVFTENLENPTEEEATEKAGTDGTTSAEDKNSTDVKETTESVPDPVLRLYLT
DDIGGSIESEILKEKPVNIKSKRLNVLARWPVKELDVYDTCLLSSLPEVSKFGTKRPQET
VSLYKCLEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRFSYSRFMK
NKLEAFVDFPIDGFDLSSYISYKNGQTTYHYMLYAISNHYGGMGGGHYTAYVHHGGDRWY
DFDDSHVNQISQEKIKTSAAYVLFYKRLVEE
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggcatcaacgtccgaggaatctcccgattcagctcagcggatcgattcgttc
aacggcgagcagagcgtctatttcgtccccttcaggtggtggaaagatgctcaagagtca
gtgccttgtgaatctgttgagaaaagagagatcttgtatacagcagcgactactgggtcg
tcttacggaggccctatgaagttgattaacaacatctttaactccgatatcttgtttgat
ctgaggagagaaggtgatgatgcgttacagagtaatgacacgggagaagcaagcgtctca
ggcagggactttgctttggtctcaagtgacatgtggctgcaggcactcaaatggcaccat
aacgataaaattaatgagaaaggcgtgaaaagtttctccactggaggcgttgacagaggc
gatgtttatccagtacaactcaggctctccgtcttgcaggaaaccaattcattggcggtt
aaaatttgcaaaaaggacaattcagttgagtgcttcagacgagcatgcaagatattcagt
ttggattcggagcagctgcgcatttgggatatttctgggcaaacaaccttgtttttccaa
aaagatatgaacaattccaaggcttgccaacaacaaacagatcaagaaattcttctagag
ctgcagatttatgggttatcagactccatcaacttgaaggaatctaaaaaagaagatggt
tccacacatcaaaccaacggaattaccaatggcacaactttcagatttggacggagtcat
tctttgagctttttgggaaaagctggagaagccggaactttggggctgacaggcttgcag
aatctaggaaatacttgtttcatgaacagctcccttcagtgcttggctcacacaccaaag
cttgttgatttctttcttggagagtacatcagagaaataaatctggagaacccattggga
atgaaaggtgagatcgccttagcttttggtgacttgttaaggagtttgtgggctccaggt
gcatcaacagtgaccccaaggacatttaaagcaaaacttggccgctttgctcctcagttt
agtggctttaatcagcatgattcgcaggaacttctagctttcttgctggatggacttcac
gaggacttaaaccgtgtaaagaacaagccatatgtggaagcaaaagatggagatggccgt
ccagacgaagaagtggctgatgaatattggcgaaatcatatggctcggaacgattcaata
attgttgatgtgtgccaaggccagtacaagtcaacattagtttgtcctatttgcaaaaag
gtttcggttatgtttgatccgttcatgtacctatcgctacctttgccatgcacgtcaatt
cgaacaatggatttaacagtcatgagtgccgatggaggtagtctgcctgtctcagtgact
gtcaacgttcccaagtttggaaaatttgaagatcttcagaaagctcttgtaactgcctgc
tctttgccagaggacgagactttaatggttactgaggtgtacaacaatcggattcttcgt
gtcctggaggatcctagtgattcattgtccttgatcagagatggtgacaaacttgtcgtg
tatcggttaaagaaagatgcaaacgattctcctttgattgtatttatgcatcagaagctg
gaagagcagttcatctgtgggaaatcaagcccaacttggaagggatttggaatccccttg
gtctcgaggctttgtgatgtcgagaatggatttgatgttgagaagatgtaccttaagttg
cttagttcatttaagatgcctagtgaagtcttcacagagaatcttgaaaatcctaccgaa
gaagaagcaactgaaaaagcaggtacggatggtactacttcagctgaggataaaaattcc
actgatgtgaaggagactactgagtctgttccagaccctgtgctgaggctttacctaacc
gacgacataggaggctcaatagaatctgagatattgaaagaaaagcctgtaaatatcaaa
tccaagcggttgaatgtgcttgcacgttggccagtaaaagagctagacgtttatgatact
tgtcttctgagctccttgcctgaggtttccaaatttggaactaagaggccccaggaaacc
gtctcgctttacaagtgcctcgaagcattcttgacggaggagcctcttggtcctgatgac
atgtggtattgtcctggctgtaaagaacaccgacaagccattaaaaagttggatctctgg
aggttgccagagatactggtgattcatctgaagaggttttcttatagccggtttatgaag
aacaagctggaggcctttgtggatttcccgatagatggttttgatctgtcaagctacatc
tcatacaagaatggtcagacgacttatcactacatgctctatgcgattagcaatcactat
gggggcatgggaggtggtcattacactgcatatgtccaccatgggggagatcgatggtat
gactttgatgatagccatgtcaatcagatcagccaagaaaagatcaagacttcggctgct
tacgttctgttttataaacgtttagtagaagaataa
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