Brassica napus (rape): 106386979
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Entry
106386979 CDS
T04128
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 5
KO
K10523
speckle-type POZ protein
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106386979
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
106386979
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
BACK
TRAF-mep_MATH
MATH
NitrOD2
Motif
Other DBs
NCBI-GeneID:
106386979
NCBI-ProteinID:
XP_013682260
UniProt:
A0A816I1F5
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Position
C3:5379599..5382365
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AA seq
410 aa
AA seq
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MSGSQIPRSNPDRVSSPTSSKSVTQTVNGSHQFVIQGYRLAKGMGVGKHIASDNFSVGGY
QWGIFFYPDGKNPEDNSAYVSVFVALASEGTEVRALFELALVDQSGKGNHKVHSHFERSL
DSGPYTLKYKGSMWGYKRFYRRTQLETSDFLKDDCLIINCTVGVVVSEVQCPRLHSIRVP
DSELGSHFGVLLDSMEGSDVTFDIAGEKFQAHKLVLAARSPFFKSKFFNEPEANNREVTI
NNLEPKVFKALLQFMYKDSLPEDVEPVTAHTFDLLKLPDIYETLIVKLLAAADRYNLNRL
RLLCESHICKGVSVKSVAKILALADRYKATELKDVCLKFTAENLAAVLETDAYQQLKDEC
LSLQSELLKAVAGYEEASNSTGGAKSQSVWAQLSDGGGDTSSRHVRQRTT
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtccggatcacagatccccagatcgaacccggatcgggtctcatcccccacgagctcc
aagtccgtgacgcagacggtgaacggctcccatcaattcgtgatacaagggtacagatta
gcgaaagggatgggcgttgggaagcacatcgcgagcgataacttctccgtcggaggctac
cagtgggggatcttcttctacccggacggtaagaatcccgaggataactcggcttacgta
tccgtcttcgtggcgttggctagcgaaggcaccgaggtcagggcgcttttcgagctggct
cttgttgaccagagcgggaaggggaatcataaggttcatagccatttcgagaggtcgctt
gatagtgggccttatactctcaaatacaaaggaagcatgtggggatacaagcgtttctat
aggcgtacccagcttgagacatctgactttctcaaagacgattgcctgataatcaactgt
acggttggagttgtggtttccgaggtacagtgcccacgtttacactctattcgcgtccct
gattcagaacttggatcacattttggagttttgctggatagcatggaaggttctgatgtc
acttttgacattgctggcgaaaagtttcaagctcataaactagtactggcggctcgatct
ccatttttcaagtctaaatttttcaacgagcctgaagcaaacaatagagaggttacgatc
aacaatctagaaccaaaggtttttaaggctttgctacaattcatgtataaagattctctt
cctgaagatgtggagcctgtgacagctcatacatttgacctcttaaagctgcctgatata
tacgagacattgattgtaaagctcttagcggctgcggacaggtataatctgaataggctc
aggttgttgtgtgaatctcacatctgcaaaggtgtatcagtgaagtccgtagccaagatc
ttagcattggctgacagatataaagctacagaactaaaggacgtttgcctaaaattcact
gccgagaatctagcagctgttctagagacagatgcttaccagcagctgaaggatgaatgt
ctgtccctccagtccgagcttctgaaggcagtggctggttacgaggaagccagcaacagc
acaggaggagccaagtctcagagcgtttgggctcaactatcagacggcggtggtgatacc
agcagccgacatgttagacaacgcaccacctag
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