Brassica napus (rape): 106387082
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Entry
106387082 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106387082
04121 Ubiquitin system [BR:
bna04121
]
106387082
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106387082
Membrane trafficking [BR:
bna04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
106387082
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106387082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_16
zf-C3HC4_3
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
106387082
NCBI-ProteinID:
XP_022551621
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All DBs
Position
C2:6520557..6522398
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AA seq
388 aa
AA seq
DB search
MPSTPPTTPITTSYWCYSCTRFVSVWAEQGTTNGLACPHCDGGFIEQVTDSSTAAAELAS
PASTEVRSINSSRRSVIRRRRSSRRPSFNPVIVLQGGAGEGEEGDAARDRRAFEFYYDDG
SGSGLRPLPDSVSEILMGSGFERLLEQLSQIEATGAGLGRSGNPPASKSAIESLPRVEIS
DCHITAEANCAVCTEVFEGETEAREMPCKHIFHEDCIVPWLSIRNSCPVCRFEIPSESNQ
RSSEEGDSAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGLGGNSEGPRRI
SWVRGNGAVESDGSNGGGSGSGGRLRRMVRGMVSLMRRVRPNRGSNSSSAAVSASDSEVE
SRVMDRSNSVLRRYFGRNRSNRGSSVLH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcaacgccgcctacaactccgatcacgacgtcgtattggtgttacagctgcacg
cgattcgtcagcgtctgggctgaacaaggcaccaccaacggcctcgcttgtcctcactgc
gacggcggtttcatcgaacaagtcaccgattcctccaccgccgccgccgaattagcctcc
ccagcttccaccgaagttagatcgatcaacagcagccgtagatccgtgattagacggcgg
agatccagtcgccgcccttcctttaacccagtcatcgttctccaaggaggcgccggcgag
ggagaggaaggagacgcggctagagaccgacgcgctttcgagttttactacgatgacgga
tccggatcgggcctcagaccgcttccggattcagtatccgagatcctgatgggatcggga
ttcgagcggttgctcgagcagctgagtcaaatcgaggcgacgggcgcgggactcggcaga
tccggaaacccgccggcgtcgaaatcggcgattgagtctttgcccagagtcgaaatctcc
gattgccatataaccgctgaggcgaactgcgcggtttgtaccgaggttttcgagggggag
acggaggcgcgtgagatgccgtgtaagcacatttttcacgaggactgcatcgtgccgtgg
ctctcgatccgaaactcgtgcccggtctgcagattcgagattccttcggagtctaaccaa
cggagcagcgaggagggtgatagcgccgtggggatgacgatatggagactccccggaggg
gggtttgctgtcgggaggtttaacgcggcgatgagagatggggagagagtgttgcctgtt
gtgttgacggagatggatggtggtgggcttggtgggaacagcgaggggcctagacggatc
tcgtgggttagaggtaacggagcggttgaatcagatggtagtaacggtggtggatccggg
tcgggagggaggttgagacggatggttcgtgggatggtttcgttgatgaggagagtgaga
ccaaaccgtgggtctaattcctcttctgctgctgtttcagcttcggacagtgaagtggaa
tctagagttatggatcggtctaattcagtgctgaggagatactttgggcgaaacagaagt
aacagaggttcttcggttctgcattga
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integrated database retrieval system
