Brassica napus (rape): 106387241
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Entry
106387241 CDS
T04128
Name
(RefSeq) autophagy-related protein 18e
KO
K22991
WD repeat-containing protein 45
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106387241
Membrane trafficking [BR:
bna04131
]
Autophagy
Other autophagy associated proteins
Others
106387241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_IFT140_2nd
WD40_Prp19
BCAS3_WD40
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_IFT80_2nd
NBCH_WD40
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
tify
Motif
Other DBs
NCBI-GeneID:
106387241
NCBI-ProteinID:
XP_013682514
LinkDB
All DBs
Position
C3:complement(1084750..1087252)
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AA seq
386 aa
AA seq
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MSSMIFSTVRGIGSFSTVRGIGSFLKSKTCDTPIDEAAKGDTKVLSVSWNQDWSGFIVGT
ERGFNVYSCNPIKESISRETHKSGFKIVEMLFLSNLFALVGNGYSNSEYPPNKVFIWNDH
TNSCFCELGFKSQVVAVKLRRKHIMVVLERSVYVYNFTNLKVQSIIETAVNPRGLCCVSQ
AEAKAVLACPGLHPGQVQVRDLKRNIVKVIKAHDSDVACMSLTLDGSLLATASTKGTLIR
IFNSLDGTLLQEFRRGMERTEIYSVAISSNMKWVAASSEKGTLHVFHLRPDILSSPKDID
HASSLSLMRGILPMYSYGNERSFAQFSLPVSTKFIVGFGPENTVLLVGIDGSFRRCRFDG
EGGQMVELEHKHFFSLTQTEDAVVVM
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgatgatattctccacagtccgtggaataggatcgttctccacagtccgtgga
ataggatcgttcttaaaatctaaaacttgcgatacaccaatagatgaagccgccaagggt
gacacaaaggtattatcagtgtcctggaaccaggactggagcggtttcattgtcggaaca
gaacgtggcttcaatgtatacagctgcaacccaatcaaagaaagcatcagccgcgaaaca
cacaaatccggctttaaaatcgtggagatgctcttcctctcaaacctcttcgctcttgtc
ggcaacggttacagcaactcggagtatcctcccaataaagtcttcatctggaatgatcac
acaaacagctgtttctgcgagctcggttttaaatcacaagttgtggcggtgaaactgagg
agaaaacacattatggttgtccttgaaagaagtgtctatgtctacaatttcaccaacctc
aaggttcagtctattatcgaaactgctgtgaatccaagagggctctgttgcgtctctcaa
gctgaggcgaaagctgtcctggcttgccccggattacacccggggcaagttcaggtccgt
gacttgaaaaggaatatagttaaagtcatcaaagcacatgattctgatgttgcttgcatg
agtttgactcttgatggaagtttgctagctactgctagcaccaaaggaacactgatcagg
atctttaactcccttgatggtactctcttacaagagtttcggagagggatggagagaaca
gagatctatagcgttgcaatctcttctaatatgaaatgggtggctgcgtcaagtgagaaa
gggactctccatgtgtttcatctgagacctgacattcttagttcaccaaaagacatcgat
cacgcttcatcattgtcgttaatgagagggatattgccaatgtattcttatggcaatgaa
cggtcgtttgctcagttctcgttgccggtttcaaccaagttcattgtaggttttggacca
gagaacacagttctacttgtaggcatcgatggaagtttccgaagatgcaggtttgatgga
gaaggagggcagatggtggagttggaacacaaacatttcttctccttaacacaaacagaa
gacgcagtggttgtaatgtga
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