Brassica napus (rape): 106387350
Help
Entry
106387350 CDS
T04128
Name
(RefSeq) myosin-13 isoform X1
KO
K10357
myosin V
Organism
bna
Brassica napus (rape)
Pathway
bna04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
106387350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106387350
04131 Membrane trafficking [BR:
bna04131
]
106387350
03029 Mitochondrial biogenesis [BR:
bna03029
]
106387350
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bna04812
]
106387350
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
106387350
mRNA cycle factors
P-body specific factors
106387350
Membrane trafficking [BR:
bna04131
]
Others
Actin-binding proteins
Myosins
106387350
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
106387350
Cytoskeleton proteins [BR:
bna04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
106387350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
nSTAND3
AAA_18
AAA_22
ProQ_C
DUF87
RNA_helicase
CbiA
AAA_19
ABC_tran
Motif
Other DBs
NCBI-GeneID:
106387350
NCBI-ProteinID:
XP_013682643
LinkDB
All DBs
Position
C7:827747..836424
Genome browser
AA seq
1484 aa
AA seq
DB search
MVSSTVKVGSFVWVEDPEEAWLDGEVIEVNGDDIKVRCTSGKMVVVKVSKAYPKDMEVPP
SGVADMTTLAYLHEPGVLQNLKSRYYIDDIYTYTGDILIAVNPFKQVENLYNDHMIALYK
GAPFGSLMPHPFAVADAAYRQMINEGVSQSILVSGESGAGKTETAKTLMKYLAKMGGRAV
NDLSTRRRSVEDQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQRGRISGAAIKTY
LLERSRVCQVSDYERNYHCFYMLCAAPPEDTRKLKLEDPTTYRYLNQSRCIKLEGMDDSK
EYTKTREAMSIVGISSEEQEAIFRILAAILHLGNIEFTNGEETDSSVPKDKKSLKIAAEL
FMCDEQALEDSLCKRVMVTPEETLSRCLDPESAALSRDALAKFLYSRLFDWIVNKINNSI
GQDPDSKNMIGVLDIYGFESFKTNSFEQFCINLTNEKLQFHFNEHVLKMEQDEYKKEEIE
WNHIDFPDNRYVLELIEKKPGGIIALLDEACMFPRSTHETFSQKMYETFKKNEYFRKPKL
ARTDFTVCHYAGDVTYQTEQFLEKNKDYVVAEHQALLGASSCTFIAGLFPLQMEDASKQS
KFSSVASQFKQQLALLIERLSTTEPRYIRCVKPNNLLKPSIFENQNVLQQLRCGGMMEAI
EICRAGYPTRKRFDEFLDRFSILASLTLDKSYDEKAACKKLLEAVGLEGYQIGKTKVLLM
AGQMAELDARRTEVLGRAARIIQWKFRSYLVIKSAINMQAVGRGHLARHRFEDMRRKEAA
ALKIQRALRIYLERRTYIEAIVTVQSCLRGMAARNALRKKTKATLVIQIHCRRFLAETHY
KKLKKAAVTTQSAWRARLARKELRELKMAAKETGALQAAKSKLEEQVEDLKLTLELEKRM
RVDVEESKTQENAKLQLALQEVQDQLKETKVSLLKEVEAAKKTAEMVTVVKEVPIVDTEL
VEKLKSENENLKSMVTSLEQKIDETEKKFKETTKISEERLKQVLEAESKALEAESKIVDL
KTAMDKLQKMLEDVKNENQVLKQSVSSTPVETASETFPSTPVKNLQNVHHPSEENASLQG
NMFTTPARIQGPRGSRFDPRHEDVDALINCVTKSVGFSQGKPVAAFTIYRCLLHWKSFEA
ERTNLFDRLVQMIGSAIKNEEEEENASLAYWLSNTSTLLFMLQQSLKSGGTGDNTPLRNS
PSLVWWMTKGFRSPAAEAIRPVDAKVPALHFKQQLAAYVENIIGIIWDNLKTELNTFLTL
CIQAPITFKGNELISDSTAKHWEGITEALNALLTTLKDNFVPPVLIQTIFSQAFSLINVQ
LFNSLVTRRDNCSFINGEYAKSGLDKLEKWCSETNEEYAGSSWDVLKHTRQAVGFLLIHK
KDRISYEDIANDLCPILSIQQHFRLCTLYKDEIYNTESVDQKVIESMEKVMILIDISDFL
LKDDSSNSMSMLIDDLSSSMQDKDFSQVKPAEELVENPSFVFLQ
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atggtttcttctacagttaaagttggctccttcgtttgggtggaagatccagaggaggca
tggttagatggagaagttattgaggttaatggagatgatattaaggtccgatgtacctca
gggaagatggtggttgtcaaagtttcaaaggcatatccgaaagatatggaagttccacct
tctggagtggccgacatgacaacgctagcatatctacatgaaccaggggtcctacagaat
cttaaatcaagatattacatagacgacatttatacttacacaggagatattttgattgcg
gtgaacccttttaaacaagtagagaacctttacaatgaccatatgattgcactctacaaa
ggagctccctttggatcattgatgcctcatccgtttgcagttgcggatgcagcttacaga
caaatgattaatgagggtgttagtcaatcaatcttggtaagtggtgaaagtggagcaggg
aagactgagactgctaaaacgcttatgaaatatctggctaaaatgggaggtcgagctgtc
aatgatctctcgaccagaaggaggagtgttgaagatcaagttttggagtcaaatcctgtt
ttagaagcatttgggaatgcaaagaccgtcagaaacaacaattcaagtcgatttggtaaa
ttcgtggagattcagttcgatcaaaggggaaggatatcaggagctgccatcaagacttat
ttgttagagagatcaagggtgtgccaagtgtcagattatgagagaaactatcactgcttt
tacatgctttgtgctgcaccacctgaggacactagaaaacttaagctagaggatccaaca
acataccgttatctgaatcagtctcgttgtattaagttagaggggatggatgattcgaaa
gagtatactaaaacccgagaagcaatgagcattgtcgggataagctcagaggagcaggaa
gcgatatttcgaattttggcggctattcttcatctaggtaacatagaatttaccaacgga
gaagaaacagactcgtcagttccaaaagacaagaagtcactgaagattgcggctgagctt
ttcatgtgtgatgagcaagcactggaagattctctttgcaaacgtgtaatggtgacacct
gaagaaacactttccagatgtctggatcctgaatctgcagcattgagcagagatgctttg
gcaaaatttttatactcaagattgtttgattggattgttaacaagatcaataattcaatt
gggcaagatcctgactcgaaaaacatgatcggagtgcttgatatttatggattcgagagt
ttcaagacaaacagctttgaacaattttgcatcaatttgaccaatgagaaacttcagttc
cactttaatgagcacgtcttaaaaatggaacaagatgagtacaagaaagaagaaattgag
tggaaccacatcgatttcccagataatcgatatgttttggaacttattgagaagaaacct
ggtggtataattgctcttctggatgaggcttgcatgttcccaagatcaacgcatgaaaca
ttttctcaaaagatgtatgaaacattcaaaaagaacgagtacttccgcaagccaaaatta
gctcgtactgacttcacagtttgccactacgccggtgatgtcacttatcagaccgaacag
tttctggaaaagaacaaagattatgttgttgctgagcatcaggctcttctgggtgcttct
agttgcacttttattgcaggtctatttcctcttcaaatggaagatgctagcaaacagtca
aagttttcttctgtagcttcacaatttaagcaacaattggcattattgattgaacgtctc
agtactactgaacctcgctatattcgttgcgttaagcccaataatcttctgaagccttct
atctttgagaaccaaaatgtcctgcaacagctacgttgtgggggtatgatggaggcaatt
gagatttgtcgtgctggatatcctacacgaaaacgttttgatgaattcctggacagattt
agtatcctagcttctcttactttggataagagttatgatgagaaagcagcctgcaagaaa
cttctggaggcagttggactcgaaggataccagattggaaagacgaaggttctcctcatg
gctggacagatggctgagttagatgctcggaggactgaggtcttaggaagagctgccaga
attatacagtggaaattccgctcctaccttgtcatcaaatctgcaataaatatgcaggct
gtgggcagaggtcatcttgctcgacatagatttgaggacatgcgcagaaaagaagcggct
gctttgaagatccagagagctttgcggatctaccttgagaggcgtacttacatagaagct
attgttacagttcagtcatgtttgcgcggcatggctgctcgcaatgcactacgaaagaag
accaaggccacacttgttattcagattcattgccgtagattcctggccgagacgcactac
aagaagctgaagaaagcagcggttactacacaaagtgcatggagagcaaggctagcccgt
aaagaactgcgagagcttaagatggctgcaaaagaaactggagccctacaagctgccaag
agcaagcttgaggagcaagtggaagatctcaagttgacactggagctagagaaacgcatg
agggtggacgtggaagaaagtaaaacacaagaaaatgcgaaactgcaattggcattgcag
gaagtacaagaccagctcaaggaaaccaaagtgtctctcttaaaggaagtggaagctgcg
aaaaagactgcagaaatggttactgtggtaaaggaggttcctattgttgacactgagcta
gtggagaaactcaagagtgaaaacgaaaacctcaagtccatggtaacttcgctggagcag
aagatagatgaaacagagaaaaaattcaaggagacgaccaaaattagcgaggagagactg
aagcaggttttagaagctgaaagcaaggctttggaagctgaaagcaaaatcgttgatttg
aagacagccatggacaaactccaaaagatgttagaggatgtaaaaaacgaaaatcaagtt
ttgaagcaatctgtctcaagcacacctgttgagacagcatcagaaactttcccttctact
ccagtaaagaacctgcaaaatgtccaccatcctagcgaagaaaatgcgtctctgcaggga
aatatgtttaccacaccagcaaggattcaaggaccgaggggatcccgttttgatcctcga
catgaggatgtggatgccctgatcaactgtgtcacaaaaagtgttggattcagtcagggg
aagcctgtagcggcatttaccatctacagatgtcttcttcattggaagtcttttgaagca
gaaagaaccaatttgtttgatcgtcttgttcaaatgattggttctgctattaagaatgaa
gaagaagaagaaaacgctagtttggcatattggttatccaatacatcgaccttactgttc
atgctccaacaaagcttgaaatctggtggaaccggggataatactccacttcgaaactca
ccttccttggtctggtggatgaccaagggtttccgttctccagcggctgaagcgattagg
ccggttgatgccaaggttccagctctgcatttcaagcagcagcttgcagcctatgttgaa
aacattattgggattatctgggataacctgaaaacggagctgaacactttccttactctc
tgcatccaggcaccaattacgtttaaggggaatgaactgatatctgatagcactgctaaa
cactgggaagggattactgaagccttaaatgcactgctaaccacacttaaagataacttt
gttcctccggttcttatccagactatattctctcaggctttctcactcatcaatgtccaa
ctgtttaacagccttgtcacccgacgagataactgttcatttatcaatggagaatatgca
aaatctggtttagataagttagagaaatggtgctccgaaacaaatgaagagtatgctggc
tcatcgtgggatgtactaaaacataccagacaagctgttggattcctgctcatccacaag
aaagatagaatctcatacgaagatattgcaaatgatctgtgtccaatccttagcatacag
cagcatttcagactgtgtactctgtacaaggatgaaatctacaacacagaaagtgttgat
caaaaggtgatcgaaagcatggaaaaagttatgatactgatagacatcagcgacttcttg
ttaaaagatgattctagcaacagcatgtccatgttgatcgatgacttatcaagttcgatg
caagataaggacttttcccaagtgaaacctgccgaggaacttgtggagaacccatctttc
gttttcttgcagtag
DBGET
integrated database retrieval system
