Brassica napus (rape): 106387434
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Entry
106387434 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106387434
04121 Ubiquitin system [BR:
bna04121
]
106387434
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106387434
Membrane trafficking [BR:
bna04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
106387434
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106387434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
HypA
zf-HC5HC2H
zf-RING_10
RING_XB3-XBAT31
zf-HC5HC2H_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
106387434
NCBI-ProteinID:
XP_013682752
LinkDB
All DBs
Position
C3:complement(7149111..7150921)
Genome browser
AA seq
370 aa
AA seq
DB search
MEETMAARYWCHMCSQMVNPTMESEIKCPFCQSGFIEEMSGNGNGGGGLRDVQDPETEFG
TTDRAMTLWAPILLGMMSSPRRRRRFRRAEFGEEEEDNEDESNNVDHHHRARRHGGEIDL
DREFESLLRRRRRSSGNILQLLQGIRAGIASEYESSDNNERVIMINPYNQSLVVRDQTQT
HSALTSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKVTEPLLQCSVCL
DEFERGVEAKEMPCKHKFHVKCIVPWLEIHSSCPVCRFELPAGNDDDDDESKVVSERGGA
RTRAVPESSDREEVVENVERGREDDVRSGNGRRFSIPWPFSGFFSSSSSSSGPSQSGENN
VYSRSYGSSR
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaacaatggcggctaggtactggtgtcacatgtgttcacagatggtgaaccca
acaatggaatccgagatcaaatgccccttttgccaaagcggattcatcgaagaaatgagc
ggtaacggtaacggaggaggaggcttaagagacgttcaagacccagaaacagagtttgga
acaacagaccgtgcgatgactctatgggcaccaatcttgcttggaatgatgagcagtcct
cggagacgaagaaggttcagaagagcagagtttggcgaagaagaagaagacaacgaagac
gaatccaacaatgttgatcatcatcatagagctaggcgacacggtggagagattgatttg
gacagagagtttgaatctctgttaaggagaagaagaagaagctcagggaatatacttcag
ctccttcaagggatacgtgcagggattgcttccgagtacgaaagctctgataataacgag
agagtcatcatgatcaatccttataaccagtccctcgttgttcgagatcaaacgcagact
cattctgcgttgacttcgcttggagactacttcatcggacctggtttggatctattgctt
cagcatttggctgagaacgatcccaacaggcaagggactccgcctgctcgcaaagaagcc
gttgaagctttgccgacggttaaagtgacggagccgttgctgcagtgttcggtttgtttg
gatgagtttgagagaggcgtggaggctaaggagatgccgtgtaagcataagtttcatgtc
aagtgtattgttccgtggcttgagattcatagctcgtgtcctgtttgtcggtttgagctt
cctgctgggaatgatgatgatgatgatgagagtaaggttgtgtctgagagaggaggagcg
agaacgagagctgttcctgagagtagtgacagagaggaggttgttgagaatgtggagaga
ggaagagaggatgatgtgaggagtgggaatgggaggaggttttcgattccatggccgttc
agtggtttcttctcttcttcttcttcgtcctctggaccatcgcagtctggtgagaacaat
gtgtactcaagatcttatggttcttctcgctga
DBGET
integrated database retrieval system
