Brassica napus (rape): 106387441
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Entry
106387441 CDS
T04128
Name
(RefSeq) chaperonin 60 subunit beta 3, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106387441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106387441
03110 Chaperones and folding catalysts [BR:
bna03110
]
106387441
03029 Mitochondrial biogenesis [BR:
bna03029
]
106387441
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106387441
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
106387441
Messenger RNA biogenesis [BR:
bna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
106387441
Chaperones and folding catalysts [BR:
bna03110
]
Heat shock proteins
HSP60 / Chaperonin
106387441
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
106387441
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106387441
Exosomal proteins of other body fluids (saliva and urine)
106387441
Exosomal proteins of breast cancer cells
106387441
Exosomal proteins of colorectal cancer cells
106387441
Exosomal proteins of bladder cancer cells
106387441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
106387441
NCBI-ProteinID:
XP_013682764
LinkDB
All DBs
Position
C3:complement(7087497..7090863)
Genome browser
AA seq
595 aa
AA seq
DB search
MASTFSAASSMGSSLAPPASRLSSLVSSNSFGKSQAFAQRKARFPKIYAAKQLHFNKDGT
AIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGA
KLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTTKALVAEL
KKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVTLEEGKSAENSLYVVEG
MQFDRGYISPYFVTDSEKMCAEYENCKMFLVDKKITNARDIISILEDAIKGGYPLLIIAE
DIEQEALATLVVNKLRGTIKVAALKAPGFGERKSQYLDDIAALTGATVIREEVGLQLEKV
GAEVLGNAGKVVLTKDTTTIVGDGSTEEVVKKRVEQIKNLIEAAEQDYEKEKLNERIAKL
SGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAVKES
LANDEEKVGADIVKKALSYPLKLIAKNAGVNGSVVSEKVLSSDDPKHGYNAATGKYEDLM
AAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEINEPESAAPAGNPMGNSGYGF
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaccttcagcgcagcgtcttcaatgggctcatccttagctcctcctgcgagc
agattatcatctctcgtctcatcaaactcttttggaaagagtcaagcttttgctcagagg
aaagcgaggttccccaagatctacgcggctaagcagttgcatttcaataaagacggcact
gccattaggaagcttcaagctggtgtgaacaagctcgcggatctagttggagtcactcta
ggtcctaaaggcaggaacgttgttctcgagagcaagtacggctcaccaagaatcgttaac
gacggtgttacagtcgctagagaggttgagcttgaggatccagttgagaacattggtgct
aagctagtgaggcaagctgcttccaagaccaatgacttagccggtgacggaacaaccact
tccgttgttcttgcgcaaggtctcatcactgaaggtgtaaaggtggtggctgctggtgca
aacccggtgttgatcaccagaggaatcgagaaaaccaccaaagctcttgttgccgagtta
aagaagatgtcaaaagaggtggaagatagtgagcttgcagatgtggcagcagttagtgca
ggaaacaactacgaagtaggcaacatgattgcggaagcaatggctaaagttggacgcaaa
ggtgtggtcactctcgaagaaggcaaaagcgctgagaacagtctctacgtcgttgaaggg
atgcagtttgaccgtggctacatttctccttactttgtcactgacagtgagaagatgtgc
gcagaatacgagaactgcaagatgtttcttgttgacaagaaaataacgaacgctagagac
attatcagtatcctggaagatgctatcaaaggtggttacccgcttctgatcattgctgaa
gatatcgagcaagaggcgttggcgactcttgttgttaataagcttcgtggtactatcaaa
gttgctgctctgaaagctcccggatttggagagaggaagagtcagtaccttgatgacatt
gctgctcttacaggagctactgtgattagggaagaagttggactacagctggagaaagtt
ggagcagaagttttgggtaatgctggtaaagtggttctcacaaaagacactacgaccata
gttggtgatggaagtactgaagaggttgtgaagaagagagttgaacagatcaagaatctt
atcgaggctgctgagcaagattatgagaaggaaaagcttaatgagagaatcgctaaatta
tcaggcggtgttgctgtgattcaggttggagcacaaactgagacagagcttaaggagaag
aaactgagagttgaagatgctcttaatgctacaaaggcggctgtggaagaaggtattgtt
gttggaggtggatgcactctgctaagacttgcatccaaagtggatgctgttaaagagagt
ctagcaaatgatgaagaaaaggttggagctgacattgttaagaaagcattgagctaccca
ttgaagttaatcgccaagaatgctggtgttaatggcagtgttgtcagcgaaaaggtactc
tctagcgacgacccaaagcatggttacaacgctgcaacaggcaaatacgaagatctgatg
gctgcaggaatcattgatccaaccaaagttgtgagatgttgcttagagcatgcttcatca
gtggctaagacattcttgatgtctgattgtgtggttgtggagatcaatgagcctgaatca
gcagctcctgctggtaaccctatgggcaactcaggttatggcttctaa
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