Brassica napus (rape): 106387534
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Entry
106387534 CDS
T04128
Name
(RefSeq) cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
bna
Brassica napus (rape)
Pathway
bna03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106387534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106387534
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
106387534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_22
AAA_2
AAA_14
RNA_helicase
AAA_28
AAA_33
TIP49
nSTAND3
AAA_17
NPHP3_N
Vps4_C
ATPase_2
Rad17
AAA_18
Viral_helicase1
IstB_IS21
Mg_chelatase
ABC_tran
Bac_DnaA
NB-ARC
TsaE
Zeta_toxin
Cytidylate_kin2
Parvo_NS1
AAA_lid_PRS2_C
AAA_11
Nucleolin_bd
DUF4888
Motif
Other DBs
NCBI-GeneID:
106387534
NCBI-ProteinID:
XP_013682858
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All DBs
Position
C3:complement(9097937..9101182)
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AA seq
798 aa
AA seq
DB search
MGRRENSRRDLSRAMDSCGKDLSTAEEIVDALRSRYGKYKRMSRQALVLNVRNVLDARNN
NKKRVKEDEEDDDSDEGAGGGKMKKQRRLDEQSHVERRNKEKSVSSSSSSSSSEDSGGHI
STSEDAKVSPRIDLTSDCLRGSYAKMNSSTKLAPPKQRRHSDEGAGGGKMKKQRRLDVKE
KSVSSSSSSEDSGGHISKLAPPGKVGPTFKDFGGIKKVMDELDQYILSPLLNPPLFGKIG
AKPPSGILFHGPPGCGKTRLANAVANEARVPFYQISATQLLSGVSGASEENIRRLFSKAY
RTAPSIVFIDEIDAIGSKRENQQRETEKRIVTQLLTCMDGPPPGGGEDTPAAAGYVVVIG
ATNTPDALDPALRRGRRFGREIALTPPDEHARAEILSLVAQRLRLEGSFDMKRIARLTPG
FVGADLEELADMAASLCVKRIMDSRKLQPSGDCDDDRSWLRLPWSDEDLDKLFVTMSDFE
EAVKLVKGSLTREGFSTVPDVSWDDVGGLGHLRSELNNYIVRPIKYPDMYEKFGKTLETG
FLLYGPPGCGKTLVAKAVANEAGANFIHIKGPELLNKYVGESERAIRTLFQRARTSSPCV
IFFDEVDALTARRGREGDHLVVGGLLNQFLTELHGGDRRDVYVIGATNRLDAIDPAFLRP
GRFGNLVYVPLPNADDRVSILKSIANKRPLDPSVDLDAIANKYCEGFSGADLANLMDKAI
HVAVKEKFQSIESSEDGDMDFSDCTIKMTHFKQALSSVTPSVSKQQIKHYEEQRKKFQSS
TGRNNMDKINVGPSFAHE
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggggaggagagagaatagtaggagagatttgagtcgagctatggattcgtgcgggaag
gatttatctacggcggaggaaatcgtggacgccctccgttccaggtacggtaaatataag
aggatgtcccgtcaagcacttgtcctcaacgtccgaaatgtccttgatgcccgaaacaac
aacaagaagcgtgtgaaagaagacgaagaggatgatgattctgatgaaggtgctggtggt
ggtaagatgaagaaacagagacgtcttgatgaacaatcacatgtcgagaggagaaacaaa
gagaagtcagtttcttcttcttcttcttcttcttcgtcggaagacagtggcggccatatc
tcgacttctgaggacgctaaggtgagtccaaggattgatttgaccagtgactgcttaaga
ggtagctacgctaagatgaatagctccacgaaacttgctcctcctaaacagagacgtcat
tctgatgaaggtgctggtggtggtaagatgaagaaacagagacgtcttgatgtcaaggag
aagtcagtttcttcttcttcttcgtcagaagacagtggcggccatatctcgaaacttgct
cctcctggtaaagtaggacctacttttaaagactttggcgggattaaaaaagtgatggat
gagttggatcagtatattctgtcccctcttctcaatcctccattgtttggcaagattgga
gcgaagccaccaagcgggattctattccatggaccacctggctgtggaaagactcgcttg
gccaatgccgtcgccaacgaagctcgtgttcccttttatcagatttcagccacacaactt
ctttctggtgtttctggtgcgtctgaagagaatattagaaggctcttctctaaagcttac
aggactgcgccttctattgtgtttatcgatgagattgatgcaattggttctaagagagag
aaccagcaaagggagacggagaagcggatcgtaacacaactattgacttgtatggatggg
cctcccccgggaggaggagaagatacgccggctgctgctggatatgttgttgtcattgga
gctactaatacccctgatgctcttgatcctgctctcagaaggggtaggcgattcgggcgt
gagattgctctaacccctcctgatgaacatgccagggctgagattctctctctcgttgcc
caaagacttagacttgaaggttcctttgacatgaaaagaatcgctcgcttaacaccaggt
tttgttggagctgatttggaggagttagctgacatggctgccagtctttgcgtaaagagg
atcatggattcaagaaaattgcaaccctccggtgactgtgatgatgatagatcttggctg
aggctgccctggtcagacgaagatttggataagctctttgtcacaatgtctgattttgag
gaagcagtcaagttagttaagggatctttaactagagaaggtttctctaccgtgcctgat
gtctcatgggatgatgttggtgggcttggccatctacggagtgaactcaacaattacata
gtcaggcctatcaaatatccagacatgtatgagaaatttggaaagacgttagagacaggt
ttcttgctctatggaccaccgggttgtggaaagactttggttgcaaaggcagttgcaaac
gaggcaggagctaatttcatacacatcaagggtccagaacttctaaataaatacgttgga
gaaagcgagcgtgctattcggaccttgtttcagcgcgcccggacaagctcaccatgtgta
atcttctttgatgaggtggatgctttgacagcaaggcgtggcagagaaggtgatcatttg
gttgttggtggtcttttgaaccagtttctcactgagctgcacggtggagatagacgtgac
gtttatgtcatcggagctacgaacaggctcgatgcgattgatcctgccttcttgagacca
ggtaggtttgggaatcttgtgtacgtacccctccctaacgcggatgaccgtgtttcgatc
ctaaaatctattgcaaacaagagacccttagatcctagtgttgatctggatgccattgca
aacaagtactgtgaaggtttcagcggagctgatctcgctaacctgatggacaaagctata
cacgtggctgtgaaggagaagttccagtccattgagtcgtctgaagatggcgatatggat
tttagtgattgcaccatcaagatgactcatttcaagcaagccttgtcctcagtcacacca
tctgtcagcaaacagcaaataaaacactacgaggaacaacggaagaaatttcaaagcagc
accggaagaaacaacatggacaaaatcaacgtaggaccatcttttgcccacgagtga
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