Brassica napus (rape): 106387600
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Entry
106387600 CDS
T04128
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 15-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bna01002
]
106387600
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106387600
Enzymes [BR:
bna01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106387600
Peptidases and inhibitors [BR:
bna01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106387600
Ubiquitin system [BR:
bna04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106387600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
106387600
NCBI-ProteinID:
XP_013682952
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All DBs
Position
A8:20574068..20580346
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AA seq
871 aa
AA seq
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MLEPRGADIPLLFLVLVVFPVVAYILLGKWSDISKKRGRANLLAQMAAEEAFIAETEVNV
NRGVRFEAAATENRGLRTKTKAAVSAASGAVRDDFVSGVSGTVAEQRYESVAATCGVPVS
NEFHVCARCFSPAKTRCSRCKSVRYCSGQCQIIHWRLAHKDECIPVEACSSSSERASFEN
ESVLHDQDMDATMYSNGTKQKAKGKTSKSSVEFESLGISTPQVNTPGRKSVGKPNSSKSN
RESFSGEAACAGGEYKKGQTKHKSRSTIGAAVETNSRRHSVDNSCMQMNGQAFVSGMQET
CESNLGARGSFGCPNAQYPSNGTRTATLRKSGEQPCTETSKKGLVPAVSKTVRSKDTCIA
EESNGISSTMGLMKMMGLRNSTKHGDRHQNLRMIFPYEEFVKFFQCEVFYLSPRGLVNCG
NSCYANAVLQSLTCTKPLVAYLLQRSHSRSCSGKDWCLMCELEQHVMMLRESGGPLSASR
ILSQMRSINCQIGDGSQEDAHEFLRLLVASMQSICLERLGGETKVDPRLQETTLVQHMFG
GRLRSKVKCLRCGHESERYENIMDLTLEIYGWVESLQDALTQFTRPEDLDGENMYRCSRC
AGYVKARKELSIHEAPNILTIVLKRFQEGRYGKINKCISFPEMLDMIPFMTRTGDVPPLY
MLYAVIVHLDTLNASFSGHYISYVKDLRGNWFRIDDSEIHQVPMTQVMSEGAYMLFYMRS
YPRPLRGEPNGKAQVRHSLSQPRDEMKEQRKPVNRFKPRADHHKNLESSSEWSLFTSSDE
ASFTTESTRDSFSTVDYTDGCNVLDSSSPFSIFNNLRHNVEPSPHNTVACRMFSGTKSET
RYFVEEETNHNNTVVMDSAPTSHVITSRVCM
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaaccaaggggagcggacatacctttattgttcttggttttggttgtgtttcct
gtggtagcttacatattattaggtaaatggagtgatatttctaaaaagagagggagggct
aacttgctggctcagatggcagctgaagaagcttttatagctgagaccgaagttaatgtg
aataggggtgtaagatttgaggctgcggctacagagaatagaggtctaagaaccaagacc
aaggccgccgtttctgctgcgagtggtgctgtaagagatgattttgtgtctggtgtgagt
gggactgtcgctgagcagagatatgagtctgtggctgctacgtgtggggtccctgttagt
aatgagtttcatgtatgtgcaaggtgttttagtcctgctaagacacgctgctcgagatgc
aaatctgttagatactgctctgggcagtgccaaataattcactggaggctagctcataaa
gatgaatgtatccctgtggaggcttgctcttcttcatctgagagggcttcctttgagaat
gagtctgttttgcatgaccaagacatggatgctacaatgtatagtaacggtaccaagcag
aaagcgaagggaaagacttcaaaaagctctgtagaatttgaaagcttgggtatctctaca
ccacaagtcaacacgccagggagaaaaagcgtaggaaaaccaaattcttctaagtccaac
agagaatcatttagtggtgaagctgcttgtgctggtggagaatacaagaagggtcagaca
aaacataagtcgagaagcacaatcggtgctgctgtggaaacaaattctagaaggcattct
gttgataactcatgtatgcaaatgaatggacaagcttttgtaagtggtatgcaagaaact
tgtgaaagcaatttgggagcaagaggctcttttggttgtccaaacgcacaatatccttcc
aacgggaccagaactgctacactgcgcaaatccggagaacaaccatgcacagagacgagt
aagaagggactggtccctgcagtatcaaagactgttaggtctaaggatacatgcattgct
gaagaaagcaatggtatctcctcaaccatgggtttaatgaaaatgatgggtttaagaaac
tctacaaagcatggtgatcgacatcaaaacctgagaatgatttttccatatgaggagttt
gttaagttctttcaatgtgaggtgttttacttatcacctagaggcctcgtgaattgtgga
aacagttgctatgcaaacgctgtcttgcaatctttaacatgcacaaagccactcgttgct
tatttgcttcaacgatcacattcaagatcttgttctgggaaagattggtgccttatgtgt
gaacttgagcaacatgtaatgatgcttagagaatctggaggtccactttctgctagcaga
attctctcacagatgcggagtataaattgtcagattggtgatgggagtcaagaagatgct
catgagttcttaaggcttttagttgcctctatgcaatcaatatgtttggagagacttgga
ggtgagactaaagtggatccaagactgcaagaaacaaccttagttcaacatatgtttggt
ggacgtctccgctcaaaggtgaaatgcttgaggtgtggtcatgaatcagaaagatacgag
aacataatggatctcacactagagatatacggatgggtagaatctcttcaagatgcgttg
actcagtttactagaccagaagatctcgatggagaaaatatgtatagatgcagcaggtgc
gctggatatgttaaagcaagaaaagaattgagcattcatgaagcaccaaacattctcaca
attgttcttaagagattccaggaaggaagatacgggaaaataaacaaatgtataagcttt
cctgaaatgctggatatgatacctttcatgacgagaacaggagatgttcctcctctttat
atgctttacgctgttatagttcacctggatactctcaacgcatctttctcgggtcattac
atttcctatgtcaaagatttgagaggcaactggttcagaattgatgattccgagattcat
caagtgccaatgacgcaagttatgtcagaaggagcttacatgttgttctacatgagatcg
tatccgcgtcctctaagaggagaacccaacggaaaagctcaggttcggcattcactgtca
caaccaagagacgagatgaaggaacagaggaaaccagttaaccgcttcaaaccgagagcg
gaccaccacaagaacttagagtcatcaagcgagtggtctctcttcacgagctcagacgaa
gcttcattcaccacagaatcaaccagggactctttcagcaccgtggactacacagatggg
tgcaacgtcttagactcttcctctcctttctccatcttcaacaacttacgccacaacgtg
gagccgtcgccgcacaacaccgtcgcctgcagaatgttctcaggtaccaagtcagaaacc
cggtatttcgtggaggaagaaacgaatcacaacaacacggtcgtgatggactcagcacca
acatcccatgttattaccagcagagtatgtatgtaa
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