Brassica napus (rape): 106387716
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Entry
106387716 CDS
T04128
Name
(RefSeq) tetratricopeptide repeat protein 27 homolog isoform X1
KO
K24935
tetratricopeptide repeat protein 27
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bna04990
]
106387716
Domain-containing proteins not elsewhere classified [BR:
bna04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
106387716
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_14
TPR_CcmH_CycH
TPR_16
TPR_19
TPR_17
TPR_8
TPR_15
DUF7017
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
106387716
NCBI-ProteinID:
XP_013683081
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All DBs
Position
C9:complement(56724716..56730726)
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AA seq
895 aa
AA seq
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MADGEIQFLRGYELRLLRCTVSIPSSDSPPEIHLLDESQSETHPHDSLIKSLLSLIEAGD
YLGALASDAARVILGDAELELVDSVESAERVYSEVLDKVESFVVNDSSDEIDKARRAVVV
MCLAISSAFWFTRCNLTGPTDGSVKCSLPFKVSESKELVEWENWAKIQLMSAGSDLLGKF
SNLQHLVFARMLLLKLKDLLFETTATQTFELRSVSWWLVRVLLIHQRVLHERSSSLFEML
QVYMAEALDHFGALEKVESYWSTMLLQGEVSSLTSTIHLEACVLQYIYGRIDPCRLQLES
AKAASNLEFSVSGAFGFRTIHQVDPKAQMVLIAKTSSSNGDVMLASSKADVGPYEAWGVE
APEVYMTPKLVNDESESGKDSATLKPVEQAMILAQCLLIERGSRHNEMQRWDMAPYIEAI
DSQKSSYFVLRRFCDLLRVRWESTRGRTKGRALEMMGKLVEAINKSDPGASQRIPLCYAV
HLPTIPALRKEYGELLVSCGLVGEAITIFESLELWDNLINCYCLLGKKSAAVDLINAQLS
ERPNDPRLWCSLGDVTIDDSCYEKALEVSNDKSVRAKRALARSAYNRGDFEKSKMLWEAA
MALNSLYPDGWFALGAAALKARDVQKALDSFTFAVQLDPDNGEAWNNIACLHMIKKKSKE
SFIAFKEALKFKRDSWQMWENFSHVAMDVGNIDQAFEAIQKILSMSKNKRVDVVLLDRIM
TELENRNSASSLSVETEASSDESTESKPRAATPAETQRHLELLGKIIQQIVRTESTSEIW
GLYARWSRIKGDLMVCSEALLKQVRSYQGSELWKDKERFKKFARASLELCRVYMEISLST
GSKRELFSAEMHLRNTIKQATVSFPESEELKKLESCLEEVRNALKKCEETTNTKT
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggcgaaattcaattcctacgcggttacgagctccgtctcctccgatgcacc
gtatctatcccctcctcggattctcctcccgagatccatttgctcgacgaatcccaatcc
gaaacccatccacacgactctcttataaagtctctcttgtccttgatcgaagctggagac
tacctcggagctctggcctcggacgctgctagggtaatactcggcgacgccgagctggaa
ctagttgactcggttgaatcggcggaacgagtttactccgaggttctcgacaaggtcgag
tccttcgtggtgaacgattcgtcggatgaaatcgataaggctcgccgtgctgttgtggtg
atgtgcttagcaatctcgtctgcgttttggttcactcgctgtaatttgacggggccgaca
gatggatcagtgaaatgttcgttgccgtttaaagtatcagaaagtaaggagttagttgaa
tgggagaactgggcaaagattcagctcatgtctgctggctctgacttgcttgggaagttt
tcaaatcttcagcacttagtttttgctaggatgcttctgttgaagttgaaagatttgctg
ttcgagacaactgcaacccaaacatttgaactaaggagtgtttcatggtggcttgtcaga
gttctacttattcatcagagagttctacacgagcgatcttcatctttgtttgagatgttg
caagtctatatggctgaagctcttgaccattttggagccttggagaaagttgaaagctat
tggtctaccatgttgctacaaggcgaagtttcatccttaacctcaaccatacatctggaa
gcatgtgtgctgcagtatatttatggacggattgatccctgtcggttacagcttgaatct
gctaaagcagcatcaaacctcgagttctctgttagtggggcttttggatttcgtacgatt
caccaagtcgacccaaaggcacaaatggtattgatagccaaaactagttcatccaatggg
gacgtgatgttggcctctagtaaagctgatgttggaccttatgaggcttggggagttgaa
gcacctgaagtatacatgactcccaaactagtgaacgacgagagtgaatctggcaaagat
tctgcgaccttaaaaccagtcgaacaggcaatgattttggctcagtgccttttaattgaa
cgaggtagtcggcacaatgagatgcaaagatgggatatggctccatatattgaggcgatt
gattctcaaaagtcatcatattttgttctacggcgtttctgtgacttactacgtgtccgg
tgggaatcaactcggggtcgtacaaagggacgcgccctggagatgatgggtaaactggtt
gaagctatcaacaagagcgatcctggagcatcacaaagaatccctttatgctacgcagtc
catctccccaccattcctgctttaagaaaggaatacggtgagctactggtgagttgcggt
ttggttggggaagcaatcacaatatttgagagcctggagttgtgggacaatctaattaac
tgctactgccttctgggaaagaaatcagcggctgtagatctcatcaatgcgcagctttct
gagcggccaaatgacccaagattatggtgttcacttggtgatgttacgattgatgactca
tgttatgaaaaagccctggaagtgtcaaatgataagtcagttcgtgctaagcgcgctctt
gctcgtagcgcatacaatcgcggtgattttgagaagtcaaagatgttgtgggaggctgca
atggcgttgaattctctgtacccggatggttggtttgctcttggtgctgctgcgttgaag
gccagggatgttcaaaaggcactcgattcatttacttttgctgttcaactcgatcctgac
aatggagaggcctggaacaacattgcttgtctgcatatgattaagaagaagagcaaagaa
tcattcatcgcattcaaagaagcgcttaaattcaagcgagatagctggcagatgtgggag
aacttcagccatgtagctatggatgtgggaaatattgatcaggcctttgaagctatacaa
aagatactgagcatgagcaaaaacaagagggttgatgttgttttactggaccgtataatg
acagagttagaaaataggaattcagcatcgtctttatcggttgaaactgaagcttcttct
gatgaatcaacggagtcaaaaccgcgtgctgcaacaccagctgaaactcagcgtcactta
gagttgcttgggaagattattcagcagattgtccgaacagaaagtacatctgaaatatgg
ggattgtatgcaagatggagtagaatcaaaggagatcttatggtatgcagcgaggcattg
ctgaaacaagtgcgctcatatcagggatcagaactgtggaaagacaaagagcgtttcaag
aagtttgcaagagcatcgttggagctttgcagagtctacatggagatctcactgtccaca
ggaagcaagcgagagctctttagtgctgagatgcatttgaggaacacaatcaaacaggcg
acagtgagcttcccggaaagtgaggaattgaagaagctcgaaagttgccttgaggaggtg
agaaatgctctgaagaagtgtgaagagactacaaatacgaaaacatga
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