Brassica napus (rape): 106387717
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Entry
106387717 CDS
T04128
Name
(RefSeq) autophagy protein 5
KO
K08339
autophagy-related protein 5
Organism
bna
Brassica napus (rape)
Pathway
bna04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
106387717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106387717
03029 Mitochondrial biogenesis [BR:
bna03029
]
106387717
Membrane trafficking [BR:
bna04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
106387717
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106387717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_HBR
ATG5_UblB
Motif
Other DBs
NCBI-GeneID:
106387717
NCBI-ProteinID:
XP_013683082
UniProt:
A0A078FR30
LinkDB
All DBs
Position
C9:56722140..56724768
Genome browser
AA seq
334 aa
AA seq
DB search
MAANEEAMKYVWEGAIPLQIHLHKSEVASHPAPPPALVLAPRIGYLPLLVPLIKPYFKDS
LPPGEDSIWFDYKGVPLKWYIPTGVLFDLLCAESERPWNLTIHFRGYPSNVLIPCEGEDS
AKWNFVNSLKEAAYIINGNCKNVMNMSQSDQEDLWTSVMNGDLDAYTRLLPKLKMGNIED
EFSRKESLSSPVSRQGGGTEIDVAGQVKTARIPVRLYVRSVSQNFENLEDVPEIDTWDEI
SYMNRPVEFLKEKGKCFTLRDAMESLLPEYSGDRAQTSGEEEADGSQETRGEIKLVRIQG
IELKLEIPFSWVVNNLMNPEFYLHISVLVIGPQR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaatgaagaagctatgaagtatgtatgggaaggagcaattccgctgcagatt
catctccacaaatccgaagtcgcttctcaccctgctcctcctcctgctctcgtgttagca
ccaaggatagggtacttgcctctgttagttcctctgataaagccttacttcaaggattca
cttcctcctggtgaagactcaatctggttcgattacaaaggcgttcctcttaaatggtat
ataccaacaggtgttctttttgatctcctatgcgctgaatctgaaagaccttggaacctc
actatacactttaggggatatcctagcaacgtactgattccatgtgaaggagaagattct
gccaagtggaactttgttaactctttgaaagaggcggcatatattatcaatggaaactgc
aagaatgttatgaatatgtctcagagtgatcaagaggatctgtggacttctgtcatgaac
ggtgatcttgatgcctacacaaggttattacccaagcttaaaatgggaaatatcgaagat
gagttttcaagaaaagaaagtttgtcatctccagtatctcgacaaggtggtgggactgag
atagatgtggctggacaagttaagacagcaaggattcctgttcggctgtatgttcgaagt
gtaagtcaaaatttcgagaatcttgaagatgtgcctgagatcgatacatgggatgagatt
tcgtacatgaatcgccctgttgagttcctcaaagaaaaagggaaatgctttactctacgt
gacgctatggaaagtctcctcccggagtacagtggagacagagctcaaacgagtggagaa
gaagaagcagatgggtcgcaggagacgaggggagaaatcaagctggtaaggatacaaggg
atagaattgaaactagagataccgttttcatgggtggtaaacaacttgatgaacccagaa
ttctatctccacatctctgttcttgtgataggtcctcaaaggtaa
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integrated database retrieval system