KEGG   Brassica napus (rape): 106387847
Entry
106387847         CDS       T04128                                 
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-like
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
bna  Brassica napus (rape)
Pathway
bna04144  Endocytosis
bna04517  IgSF CAM signaling
bna05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:bna00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    106387847
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    106387847
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    106387847
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bna04131]
    106387847
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:bna04812]
    106387847
Membrane trafficking [BR:bna04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    106387847
Cytoskeleton proteins [BR:bna04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     106387847
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd WD40_Prp19 ANAPC4_WD40 Beta-prop_WDR35_TULP_N WDR55 Beta-prop_WDR19_1st Beta-prop_WDR3_2nd Beta-prop_Aladin Beta-prop_IFT140_1st WD40_Gbeta Beta-prop_WDR36-Utp21_1st WDR90_beta-prop_4th EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Tricorn_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML RMC1_N Beta-prop_HPS5 eIF2A Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_2nd BNR_3 B-prop_COPA_B_2nd Ge1_WD40 YqcI_YcgG
Other DBs
NCBI-GeneID: 106387847
NCBI-ProteinID: XP_013683229
UniProt: A0A078GBX8
LinkDB
Position
C3:9696357..9699575
AA seq 379 aa
MAVVDVHRFAESITCHAWSPDHSMVAFCPNNNEVHIYKSVQDQWERLHVLEKHDQIVSGI
DWSSKSNKIVTVSHDRNSYVWSLEGGEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
TVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNILLATTSTDGKCRVFSTFIKGVDV
KDPKAGSPAESKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPLA
QSVAFRDLPLRDVLFISEKMVIGVGYDTNPMVFAADDTGIWSFVRYIGEKKAVSSGSSYS
SQFSEAFTKFYGQSKATTANDGSESSKSRGGVHDNCINSVVPLSKAGSPKVMRFSTSGLD
GKIAIWDLENMQEELGHQF
NT seq 1140 nt   +upstreamnt  +downstreamnt
atggcagtggtggatgttcaccggttcgcagagtcaatcacttgtcatgcttggagtcct
gatcactccatggttgcgttttgtcctaacaataatgaagttcacatctataaatcagta
caagaccagtgggagaggttacatgtcctcgaaaagcatgaccaaattgtttctggaata
gattggagctcaaagtccaacaaaatcgtcactgtttcccatgacaggaactcgtacgtg
tggagcctggaaggaggtgagtgggtaccgactcttgttatccttagactaaaccgtgct
gcactttgtgtccagtggagtccaaaagagaacaagtttgctgttggaagtggtgctaaa
actgtttgcatatgctattatgagcaagagaataactggtgggtcagtaaacttatccgg
aaacggcatgaatcttcagtcacaagtgttgcttggcatcctaataatattcttctggca
acgacatctacagatggaaaatgtcgggtattttcaacattcatcaaaggagtagacgta
aaggatccaaaagcaggctcaccagcagaatctaaatttggggagcaaattctacagctt
gatctttcatactcttgggcttttggtgtgaaatggtctccaagtggaaacaccttggct
tatgtaggtcatagctcaatgatttactttgttgatgacgtcggtccttctcctttagct
caaagcgttgcgtttagagatttgcctcttcgtgatgtcctctttatttcggagaaaatg
gtgataggcgttggttatgacaccaacccaatggtgtttgctgcagatgatactggcata
tggagttttgtcagatacatcggagagaagaaagcggtatcctcaggttccagttatagt
tcgcagttttcggaagcatttacgaagttctacggtcagtcaaaggctacaacagccaac
gacggttctgaatcctctaaatcacgtgggggcgttcatgataactgcattaattccgtt
gttcctcttagcaaagctgggagtcctaaagtaatgcgattcagcacttcaggattggat
ggcaaaatagccatatgggatctagagaacatgcaagaagagcttggccatcagttttaa

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